Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30366
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical pr... 88 4e-18
AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal pr... 38 0.008
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 3.6
AC006671-4|AAF39917.1| 373|Caenorhabditis elegans Hypothetical ... 29 3.6
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 4.7
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 4.7
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 6.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 28 6.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 6.2
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 28 6.2
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 28 6.2
Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical p... 27 8.2
Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical p... 27 8.2
Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical p... 27 8.2
Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical p... 27 8.2
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 27 8.2
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 27 8.2
DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interact... 27 8.2
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 27 8.2
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 27 8.2
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical
protein C03D6.8 protein.
Length = 162
Score = 88.2 bits (209), Expect = 4e-18
Identities = 40/78 (51%), Positives = 49/78 (62%)
Frame = +2
Query: 26 MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAG 205
MRIE CYFCSS +YPGHGIQFVRND +F+FCRS+C+ F A R+ G
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARG 60
Query: 206 KELSIDPSFEFEKRRNGP 259
KEL D + E+RR+ P
Sbjct: 61 KELINDATQLLEQRRDEP 78
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 PLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSP 435
P+KY R ++ KTIEA K + ++ +R N I +RL+ G+ V+ + + +V + + LI++P
Sbjct: 78 PVKYERAMFQKTIEAAKTISALKTKRYGNLIRKRLQPGKIVQKKGLLAKVDKKMHLIRAP 137
Query: 436 AA---GLKQRQALEATEMEVEPET 498
A G+K R A + + ET
Sbjct: 138 VANRDGVKTRAAAKEKKTAESMET 161
>AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 24.1 protein.
Length = 159
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 26 MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSK 130
M++ETC + +++PGHG + VR D K+ F K
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGK 35
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -2
Query: 318 LFHFLHSFDCF--SPQFAIVFQGPFRLF 241
LF F+ F F +P+F+ +FQ PF LF
Sbjct: 30 LFFFIFHFSSFLPNPRFSFIFQCPFPLF 57
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -2
Query: 318 LFHFLHSFDCF--SPQFAIVFQGPFRLF 241
LF F+ F F +P+F+ +FQ PF LF
Sbjct: 30 LFFFIFHFSSFLPNPRFSFIFQCPFPLF 57
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +1
Query: 343 YIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEATEMEVEPETIEVGTLKG 522
YI + + E +RD ++ +RD + + A +++ E E +++ E E T K
Sbjct: 210 YIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQEE-KMKKEDRERATQKD 268
Query: 523 RKQIIEAPVMVPATGELIEE 582
R IE A E +E+
Sbjct: 269 RSDHIERHRQAEARAEALEK 288
>AC006671-4|AAF39917.1| 373|Caenorhabditis elegans Hypothetical
protein K08A2.4 protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 454 RQALEATEMEVEPETIEVGTLKGRKQIIEAPVMV 555
R A E EME PE E G+++ ++ +EAP+MV
Sbjct: 196 RHAAEINEMERSPEGSEGGSVE-KEVKVEAPIMV 228
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVE-WQRDVREVQRDISLIKSPAAGLKQRQA-LE 468
+A + EE+RQ + ++ ++R+R+G E++ + +R + + +K + Q +A +
Sbjct: 1774 DAARLAEELRQEQEHSMHIERIRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIR 1833
Query: 469 ATEMEVEPE 495
A E E++ E
Sbjct: 1834 AIEQELDGE 1842
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVE-WQRDVREVQRDISLIKSPAAGLKQRQA-LE 468
+A + EE+RQ + ++ ++R+R+G E++ + +R + + +K + Q +A +
Sbjct: 1774 DAARLAEELRQEQEHSMHIERIRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIR 1833
Query: 469 ATEMEVEPE 495
A E E++ E
Sbjct: 1834 AIEQELDGE 1842
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical protein
F59A6.5 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 24 KCV*KHVIS-VHPGFILDTESNLSGMTAKFSDSVVQNATQRLKRRRIPVKLNGLKLT 191
+CV HVI + G ++ SN S +FS + Q + +RR N LK T
Sbjct: 1228 ECVNAHVIGRQYEGVLISVSSNDSTEVHRFSTATGQKQKNNVSKRRGASPYNSLKRT 1284
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +1
Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 450
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK
Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1815
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +1
Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 450
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK
Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1815
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +1
Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 351 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 409
Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555
++ +E E IE + R I++ ++V
Sbjct: 410 HDL-LEKERIEQARVAERIANIQSRLIV 436
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +1
Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 365 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 423
Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555
++ +E E IE + R I++ ++V
Sbjct: 424 HDL-LEKERIEQARVAERIANIQSRLIV 450
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +1
Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 450
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK
Sbjct: 1773 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1818
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +1
Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 365 IEMLREQLKQRKTRSRDGATQSFYDAERTKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 423
Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555
++ +E E IE + R I++ ++V
Sbjct: 424 HDL-LEKERIEQARVAERIANIQSRLIV 450
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +1
Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 314 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 372
Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555
++ +E E IE + R I++ ++V
Sbjct: 373 HDL-LEKERIEQARVAERIANIQSRLIV 399
>Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486
H PSS P G + G S++C F+ + V+ S
Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143
>Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486
H PSS P G + G S++C F+ + V+ S
Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143
>Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486
H PSS P G + G S++C F+ + V+ S
Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143
>Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486
H PSS P G + G S++C F+ + V+ S
Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 378 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSRTRDHRSWDAKRQET 530
R K+R +SP R D GW T S + R S +RS + K Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 378 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSRTRDHRSWDAKRQET 530
R K+R +SP R D GW T S + R S +RS + K Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interaction
trapped/cerebralcavernous malformation 1 isoform a
protein.
Length = 729
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486
H PSS P G + G S++C F+ + V+ S
Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 581 SSINSPVAGTMTGASIICFLPFSVPTSMVSGSTSISVASKACRCFRPAAG 432
S+I+ V + SI CF+ +V ++S + K+ CFR +G
Sbjct: 526 STISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCFRIPSG 575
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 581 SSINSPVAGTMTGASIICFLPFSVPTSMVSGSTSISVASKACRCFRPAAG 432
S+I+ V + SI CF+ +V ++S + K+ CFR +G
Sbjct: 405 STISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCFRIPSG 454
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 581 SSINSPVAGTMTGASIICFLPFSVPTSMVSGSTSISVASKACRCFRPAAG 432
S+I+ V + SI CF+ +V ++S + K+ CFR +G
Sbjct: 506 STISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCFRIPSG 555
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,092,859
Number of Sequences: 27780
Number of extensions: 278842
Number of successful extensions: 924
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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