BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30366 (625 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical pr... 88 4e-18 AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal pr... 38 0.008 Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 3.6 Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 3.6 AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 3.6 AC006671-4|AAF39917.1| 373|Caenorhabditis elegans Hypothetical ... 29 3.6 Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 4.7 X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 4.7 U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 4.7 Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 6.2 Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 6.2 Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 6.2 Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 28 6.2 J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 6.2 AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 28 6.2 AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 28 6.2 Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical p... 27 8.2 Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical p... 27 8.2 Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical p... 27 8.2 Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical p... 27 8.2 U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 27 8.2 U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 27 8.2 DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interact... 27 8.2 AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 27 8.2 AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 27 8.2 AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 27 8.2 >Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical protein C03D6.8 protein. Length = 162 Score = 88.2 bits (209), Expect = 4e-18 Identities = 40/78 (51%), Positives = 49/78 (62%) Frame = +2 Query: 26 MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSKCHAAFXXXXXXXXXXXXXAYRKTAG 205 MRIE CYFCSS +YPGHGIQFVRND +F+FCRS+C+ F A R+ G Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARG 60 Query: 206 KELSIDPSFEFEKRRNGP 259 KEL D + E+RR+ P Sbjct: 61 KELINDATQLLEQRRDEP 78 Score = 51.6 bits (118), Expect = 4e-07 Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%) Frame = +1 Query: 256 PLKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSP 435 P+KY R ++ KTIEA K + ++ +R N I +RL+ G+ V+ + + +V + + LI++P Sbjct: 78 PVKYERAMFQKTIEAAKTISALKTKRYGNLIRKRLQPGKIVQKKGLLAKVDKKMHLIRAP 137 Query: 436 AA---GLKQRQALEATEMEVEPET 498 A G+K R A + + ET Sbjct: 138 VANRDGVKTRAAAKEKKTAESMET 161 >AF003151-13|AAK18907.1| 159|Caenorhabditis elegans Ribosomal protein, large subunitprotein 24.1 protein. Length = 159 Score = 37.5 bits (83), Expect = 0.008 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 Query: 26 MRIETCYFCSSRVYPGHGIQFVRNDCKIFRFCRSK 130 M++ETC + +++PGHG + VR D K+ F K Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGK 35 >Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein C52A11.4d protein. Length = 2491 Score = 28.7 bits (61), Expect = 3.6 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -2 Query: 318 LFHFLHSFDCF--SPQFAIVFQGPFRLF 241 LF F+ F F +P+F+ +FQ PF LF Sbjct: 30 LFFFIFHFSSFLPNPRFSFIFQCPFPLF 57 >Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein C52A11.4d protein. Length = 2491 Score = 28.7 bits (61), Expect = 3.6 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -2 Query: 318 LFHFLHSFDCF--SPQFAIVFQGPFRLF 241 LF F+ F F +P+F+ +FQ PF LF Sbjct: 30 LFFFIFHFSSFLPNPRFSFIFQCPFPLF 57 >AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical protein K09F6.9 protein. Length = 609 Score = 28.7 bits (61), Expect = 3.6 Identities = 20/80 (25%), Positives = 36/80 (45%) Frame = +1 Query: 343 YIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEATEMEVEPETIEVGTLKG 522 YI + + E +RD ++ +RD + + A +++ E E +++ E E T K Sbjct: 210 YIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQEE-KMKKEDRERATQKD 268 Query: 523 RKQIIEAPVMVPATGELIEE 582 R IE A E +E+ Sbjct: 269 RSDHIERHRQAEARAEALEK 288 >AC006671-4|AAF39917.1| 373|Caenorhabditis elegans Hypothetical protein K08A2.4 protein. Length = 373 Score = 28.7 bits (61), Expect = 3.6 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 Query: 454 RQALEATEMEVEPETIEVGTLKGRKQIIEAPVMV 555 R A E EME PE E G+++ ++ +EAP+MV Sbjct: 196 RHAAEINEMERSPEGSEGGSVE-KEVKVEAPIMV 228 >Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein K12F2.1 protein. Length = 1969 Score = 28.3 bits (60), Expect = 4.7 Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = +1 Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVE-WQRDVREVQRDISLIKSPAAGLKQRQA-LE 468 +A + EE+RQ + ++ ++R+R+G E++ + +R + + +K + Q +A + Sbjct: 1774 DAARLAEELRQEQEHSMHIERIRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIR 1833 Query: 469 ATEMEVEPE 495 A E E++ E Sbjct: 1834 AIEQELDGE 1842 >X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3 protein. Length = 1969 Score = 28.3 bits (60), Expect = 4.7 Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = +1 Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVE-WQRDVREVQRDISLIKSPAAGLKQRQA-LE 468 +A + EE+RQ + ++ ++R+R+G E++ + +R + + +K + Q +A + Sbjct: 1774 DAARLAEELRQEQEHSMHIERIRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIR 1833 Query: 469 ATEMEVEPE 495 A E E++ E Sbjct: 1834 AIEQELDGE 1842 >U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical protein F59A6.5 protein. Length = 1286 Score = 28.3 bits (60), Expect = 4.7 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +3 Query: 24 KCV*KHVIS-VHPGFILDTESNLSGMTAKFSDSVVQNATQRLKRRRIPVKLNGLKLT 191 +CV HVI + G ++ SN S +FS + Q + +RR N LK T Sbjct: 1228 ECVNAHVIGRQYEGVLISVSSNDSTEVHRFSTATGQKQKNNVSKRRGASPYNSLKRT 1284 >Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 27.9 bits (59), Expect = 6.2 Identities = 17/52 (32%), Positives = 32/52 (61%) Frame = +1 Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 450 +A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1815 >Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 27.9 bits (59), Expect = 6.2 Identities = 17/52 (32%), Positives = 32/52 (61%) Frame = +1 Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 450 +A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1815 >Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein F20C5.2b protein. Length = 1130 Score = 27.9 bits (59), Expect = 6.2 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = +1 Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471 IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E Sbjct: 351 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 409 Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555 ++ +E E IE + R I++ ++V Sbjct: 410 HDL-LEKERIEQARVAERIANIQSRLIV 436 >Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical protein F20C5.2a protein. Length = 782 Score = 27.9 bits (59), Expect = 6.2 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = +1 Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471 IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E Sbjct: 365 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 423 Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555 ++ +E E IE + R I++ ++V Sbjct: 424 HDL-LEKERIEQARVAERIANIQSRLIV 450 >J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain protein. Length = 1966 Score = 27.9 bits (59), Expect = 6.2 Identities = 17/52 (32%), Positives = 32/52 (61%) Frame = +1 Query: 295 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 450 +A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK Sbjct: 1773 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1818 >AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. Length = 782 Score = 27.9 bits (59), Expect = 6.2 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = +1 Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471 IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E Sbjct: 365 IEMLREQLKQRKTRSRDGATQSFYDAERTKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 423 Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555 ++ +E E IE + R I++ ++V Sbjct: 424 HDL-LEKERIEQARVAERIANIQSRLIV 450 >AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like protein (klp-11) protein. Length = 607 Score = 27.9 bits (59), Expect = 6.2 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = +1 Query: 292 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 471 IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E Sbjct: 314 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 372 Query: 472 TEMEVEPETIEVGTLKGRKQIIEAPVMV 555 ++ +E E IE + R I++ ++V Sbjct: 373 HDL-LEKERIEQARVAERIANIQSRLIV 399 >Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical protein ZK265.1b protein. Length = 656 Score = 27.5 bits (58), Expect = 8.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -3 Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486 H PSS P G + G S++C F+ + V+ S Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143 >Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical protein ZK265.1a protein. Length = 729 Score = 27.5 bits (58), Expect = 8.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -3 Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486 H PSS P G + G S++C F+ + V+ S Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143 >Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical protein ZK265.1b protein. Length = 656 Score = 27.5 bits (58), Expect = 8.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -3 Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486 H PSS P G + G S++C F+ + V+ S Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143 >Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical protein ZK265.1a protein. Length = 729 Score = 27.5 bits (58), Expect = 8.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -3 Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486 H PSS P G + G S++C F+ + V+ S Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143 >U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/polycomb) domaincontaining protein 2, isoform c protein. Length = 1510 Score = 27.5 bits (58), Expect = 8.2 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +3 Query: 378 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSRTRDHRSWDAKRQET 530 R K+R +SP R D GW T S + R S +RS + K Q T Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528 >U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/polycomb) domaincontaining protein 2, isoform a protein. Length = 1507 Score = 27.5 bits (58), Expect = 8.2 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +3 Query: 378 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSRTRDHRSWDAKRQET 530 R K+R +SP R D GW T S + R S +RS + K Q T Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528 >DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interaction trapped/cerebralcavernous malformation 1 isoform a protein. Length = 729 Score = 27.5 bits (58), Expect = 8.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -3 Query: 590 HHPSSINSPVAGTMTGASIICFLPFSVPTSMVSGS 486 H PSS P G + G S++C F+ + V+ S Sbjct: 109 HQPSSSTKPFVGHVPGLSLVCVPVFNKESVEVANS 143 >AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucleoside transporter protein. Length = 575 Score = 27.5 bits (58), Expect = 8.2 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -3 Query: 581 SSINSPVAGTMTGASIICFLPFSVPTSMVSGSTSISVASKACRCFRPAAG 432 S+I+ V + SI CF+ +V ++S + K+ CFR +G Sbjct: 526 STISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCFRIPSG 575 >AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical protein F27E11.2b protein. Length = 454 Score = 27.5 bits (58), Expect = 8.2 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -3 Query: 581 SSINSPVAGTMTGASIICFLPFSVPTSMVSGSTSISVASKACRCFRPAAG 432 S+I+ V + SI CF+ +V ++S + K+ CFR +G Sbjct: 405 STISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCFRIPSG 454 >AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical protein F27E11.2a protein. Length = 555 Score = 27.5 bits (58), Expect = 8.2 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -3 Query: 581 SSINSPVAGTMTGASIICFLPFSVPTSMVSGSTSISVASKACRCFRPAAG 432 S+I+ V + SI CF+ +V ++S + K+ CFR +G Sbjct: 506 STISKLVLRALCAGSIACFMNATVAGILISSPVICQSSQKSDTCFRIPSG 555 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,092,859 Number of Sequences: 27780 Number of extensions: 278842 Number of successful extensions: 924 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 891 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 924 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1363963182 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -