Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30365
(766 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 170 4e-41
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 156 6e-37
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 138 1e-31
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 119 7e-26
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 101 2e-20
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 99 1e-19
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 93 5e-18
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 1e-17
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 92 1e-17
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 89 8e-17
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 80 5e-14
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 79 1e-13
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 72 1e-11
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 66 9e-10
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 64 4e-09
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 44 0.005
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 43 0.007
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 42 0.013
UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1; Methano... 41 0.039
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 40 0.068
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 38 0.27
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.36
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.48
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.83
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 1.1
UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome sh... 36 1.5
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 1.5
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 36 1.5
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 36 1.5
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 36 1.5
UniRef50_UPI0000DB7910 Cluster: PREDICTED: similar to mitochondr... 34 3.4
UniRef50_A4RPC8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n... 34 4.4
UniRef50_O96282 Cluster: Putative uncharacterized protein PFB095... 33 7.8
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q83ES8 Cluster: 30S ribosomal protein S7; n=11; Bacteri... 33 7.8
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 170 bits (413), Expect = 4e-41
Identities = 82/89 (92%), Positives = 83/89 (93%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 55 RYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVN 114
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AIINSGPREDSTRIGRAGTVRRQAV P
Sbjct: 115 AIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 119 bits (287), Expect = 7e-26
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 147 VNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 80.6 bits (190), Expect = 4e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +1
Query: 118 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAG
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAG 54
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 156 bits (378), Expect = 6e-37
Identities = 72/89 (80%), Positives = 80/89 (89%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RY+ KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V
Sbjct: 48 RYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVD 107
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
A++NSGPRED+TRIG AG VRRQAV P
Sbjct: 108 AVVNSGPREDATRIGSAGVVRRQAVDISP 136
Score = 108 bits (259), Expect = 2e-22
Identities = 52/58 (89%), Positives = 57/58 (98%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
VNQAI+LL TGAREAAFRNIK+IAEC+ADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 140 VNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 197
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +1
Query: 139 EIKLFGRWSCYDVQVSDMSLQDYIS-VKEKYAKYLPHSAG 255
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AG
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAG 47
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 138 bits (335), Expect = 1e-31
Identities = 69/89 (77%), Positives = 75/89 (84%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
R+ KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV
Sbjct: 54 RFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVD 113
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
A+ GPREDSTRIG AGTVRRQAV P
Sbjct: 114 AVAACGPREDSTRIGSAGTVRRQAVDVSP 142
Score = 100 bits (239), Expect = 5e-20
Identities = 47/58 (81%), Positives = 55/58 (94%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
VNQA+ L+ GAREAAFRN+K+I+EC+A+E+INAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 146 VNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
Score = 37.5 bits (83), Expect = 0.36
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 85 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGGMH 264
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AG
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 265 T 267
T
Sbjct: 57 T 57
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 119 bits (287), Expect = 7e-26
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 223 VNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 280
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +3
Query: 384 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVMFHP 521
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAV P
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 219
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 101 bits (242), Expect = 2e-20
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = +3
Query: 279 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR 458
KA+ PI ER SLM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPR
Sbjct: 67 KARIPIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPR 126
Query: 459 EDSTRIGRAGTVRRQAVMFHP 521
ED+ RIGRAG++RR +V P
Sbjct: 127 EDTARIGRAGSMRRTSVDVSP 147
Score = 63.7 bits (148), Expect = 5e-09
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
++ AI L G R A+FRN T+AE +A+ELI A+ S NSYA+ KK E+ER+A+SNR
Sbjct: 151 ISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQSNR 208
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 99.1 bits (236), Expect = 1e-19
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 12/131 (9%)
Frame = +3
Query: 249 SWRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 428
S Y K F+K CPI+ERL SLM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+L
Sbjct: 56 SGNYDKKPFKKTYCPILERLVCSLMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLL 115
Query: 429 VTAIINSGPREDSTRIGRAGTVRRQAVMFHP----------CAESTKQSGF--CAQVHVR 572
V AI N P EDS + +G +R+AV P A TK++ F + +
Sbjct: 116 VDAISNCAPHEDSLMLSNSGQKKREAVDVSPYRKISQAIYFIAVGTKKAAFKNPKSISIA 175
Query: 573 LHSEILKQSQS 605
LH EIL +++
Sbjct: 176 LHDEILNAARN 186
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/54 (48%), Positives = 42/54 (77%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 691
++QAI+ + G ++AAF+N K+I+ + DE++NAA+ S+ SYAIKKK +LE+ A
Sbjct: 150 ISQAIYFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTSYAIKKKLDLEKNA 203
Score = 43.2 bits (97), Expect = 0.007
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +1
Query: 139 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
++K+F RW V+++D+S+ +YI +KY + +PHS+G
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSG 57
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 93.5 bits (222), Expect = 5e-18
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
R+A KRF KA+ PIVERL N +M +N GKK +A IVK AF+IIH TGENP+QVLV
Sbjct: 48 RHAKKRFAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQ 107
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
A+ N+ PRE++T I G +AV P
Sbjct: 108 ALENAAPREETTTIIYGGISYHEAVDSSP 136
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/55 (43%), Positives = 42/55 (76%)
Frame = +2
Query: 539 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
A+ L+ GA++ AFRN K I EC+A+E+I AA+ + ++I++K+E+ER+A++ R
Sbjct: 143 ALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRKEEIERIAEAAR 197
Score = 41.1 bits (92), Expect = 0.029
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 139 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGGMH 264
E+K+FG+W +V+V D L+DYI +K YLPH+ GG H
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLK---PMYLPHT-GGRH 49
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 282 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 437
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
RY + RF KA+ PIVERL N +M GRN GKK A IVK AF++I+ TG+NPLQV +
Sbjct: 74 RYQNTRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFID 133
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AIIN+ PRE+ TRI G +V P
Sbjct: 134 AIINTAPREEITRIIMGGIAYSVSVDVSP 162
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +2
Query: 539 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
A+ + GAR +F N K I EC+ADE+I AA SYA++K++ELER+A ++R
Sbjct: 169 ALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREELERIAAASR 223
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 89.4 bits (212), Expect = 8e-17
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
R+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T ENP+QVLV+
Sbjct: 61 RHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVS 120
Query: 435 AIINSGPREDSTRIGRAGTVRRQAV 509
A+ N+ PRE++ R+ G QAV
Sbjct: 121 AVENAAPREETVRLKYGGISVPQAV 145
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
V+QA+ L GA A+F+ AE +A++L AA + +YAI +K E ERVA + R
Sbjct: 153 VDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKKEKERVAAAAR 210
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 80.2 bits (189), Expect = 5e-14
Identities = 44/119 (36%), Positives = 67/119 (56%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
+++ + F KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV
Sbjct: 55 KFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVE 114
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVL 611
AI N+GPRE++ R+ G ++V P GF A+ + + K + ++L
Sbjct: 115 AIGNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAIL 173
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
V+ AI + +++ ++ K + +ADELI A+KG + Y++ KK+E ER+AKS R
Sbjct: 147 VDSAIGFIAEAVWKSSRKSKKPASAILADELIAASKGDAKCYSVGKKEEKERIAKSAR 204
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/87 (44%), Positives = 58/87 (66%)
Frame = +3
Query: 249 SWRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 428
S ++A ++F K++ IVERL N+LM N GKK + +R V+ AF+I++ T +NP+QVL
Sbjct: 38 SGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVL 97
Query: 429 VTAIINSGPREDSTRIGRAGTVRRQAV 509
V AI N+GPRE+ R+ G +AV
Sbjct: 98 VDAIANAGPREEVVRLKYGGISVPKAV 124
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
V+ A+ + G AAF++ +++AEC+A ELI AA + S++I +KD ERVAK+ R
Sbjct: 132 VDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/89 (43%), Positives = 52/89 (58%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
R + K F K + +VERL N LM N GKK + I++ A I+ T ENP+QV+V
Sbjct: 44 RNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVD 103
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
A+ NSGPRE++TRI G Q+V P
Sbjct: 104 ALENSGPREETTRISYGGIAFLQSVDVSP 132
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/49 (51%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +2
Query: 560 GAREAAFRNIKTIAECVADELINAAKGS-SNSYAIKKKDELERVAKSNR 703
GA + A ++ K+IA+C+ADEL+ A+K S+A+KKK+E ERVA+S R
Sbjct: 146 GASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKEEKERVAQSAR 194
Score = 36.3 bits (80), Expect = 0.83
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 139 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
EIKLFG+W V V D SL+ +IS+ +PH+AG
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLN---PVLIPHTAG 43
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 66.1 bits (154), Expect = 9e-10
Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAFE 386
R+A K F KA IVERL N +M G + N KK+ A +VK AF+
Sbjct: 53 RHAKKHFGKANVHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFK 112
Query: 387 IIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVMFHP 521
II TG+NP+QVLV AI N+ PRED+T + G AV P
Sbjct: 113 IIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISP 157
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 551 LCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
+ GA +R + AE +A+E+I AA SYA KK E+ER+A+S+R
Sbjct: 168 IALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 218
Score = 39.9 bits (89), Expect = 0.068
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 139 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAG 255
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ G
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLE---PRLLPHTHG 52
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/89 (38%), Positives = 52/89 (58%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
R+++ K +ERL N+LM + GKK A +++ AF+II T +NP+Q+LV+
Sbjct: 33 RFSNYLSGKRNVNTIERLLNNLMRTEKWTGKKYSAYKVMSQAFDIIATKTKQNPVQILVS 92
Query: 435 AIINSGPREDSTRIGRAGTVRRQAVMFHP 521
AI NS PRE+ TR+ G ++V P
Sbjct: 93 AIENSAPREEVTRLKYGGIAVPKSVDVSP 121
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/58 (41%), Positives = 43/58 (74%)
Frame = +2
Query: 530 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
+++A+ + GA +A+F++ I +C+A+E++ AA+ +NS+AI KK+E+ERVA S R
Sbjct: 125 LDEALRNIARGATKASFKHKIHIQDCLANEILLAARNDANSFAISKKEEIERVAASAR 182
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 49 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 213
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 638 GSSNSYAIKKKDELERVAKSNR 703
GSSNSYAIKKKDELERVAKSNR
Sbjct: 56 GSSNSYAIKKKDELERVAKSNR 77
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +3
Query: 255 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 434
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 435 AIINSGPREDSTRIGRAGTVRRQAV 509
+ GP +T+ G +++ V
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVV 184
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +3
Query: 267 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 446
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 447 SGP 455
+ P
Sbjct: 69 ASP 71
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 42.3 bits (95), Expect = 0.013
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -1
Query: 388 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYL 254
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ L
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCL 45
>UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1;
Methanococcoides methylutens|Rep: 30S ribosomal protein
S7P - Methanococcoides methylutens
Length = 69
Score = 40.7 bits (91), Expect = 0.039
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +2
Query: 560 GAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
GA ++AF++ + +E +A ELI A+ + ++I +KD ERVAK+ R
Sbjct: 22 GANQSAFKSKRXASESLASELIAASNRDAKCFSINRKDGKERVAKAAR 69
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 39.9 bits (89), Expect = 0.068
Identities = 23/86 (26%), Positives = 44/86 (51%)
Frame = +3
Query: 258 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 437
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 438 IINSGPREDSTRIGRAGTVRRQAVMF 515
+ P +T++ + G + + V +
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY 198
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 37.9 bits (84), Expect = 0.27
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 291 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 467
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 468 TRIGRAGTVRRQAVMFHPCAESTK 539
RAG++ +Q P AE +
Sbjct: 76 KPRRRAGSI-QQVPRVMPSAERAR 98
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.36
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 297 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 455
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.48
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 303 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 440
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.83
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 291 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 455
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +1
Query: 37 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 216
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 217 KEKYAKYLPH 246
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 292
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 578 FRNIKTIAECVADELINAAKGSSNSYAIKKKDELER 685
FRN+K I + V D+L+ KGSS + K+K+EL++
Sbjct: 126 FRNVKDIEDHVKDKLLLVKKGSSTELSDKEKNELKK 161
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 291 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 455
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.5 bits (78), Expect = 1.5
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +1
Query: 28 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 198
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 199 QDYISVKEKYAKYLPHSAGGMHTSVSV 279
+ Y S + K+ + P G T ++
Sbjct: 259 KQYPSSEFKFKTFTPPKTGPSITQTAL 285
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 35.5 bits (78), Expect = 1.5
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 440
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 441 INSGPRED-STRIGRAGTVRR 500
P TR + G+ R+
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRK 87
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 35.5 bits (78), Expect = 1.5
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +2
Query: 545 WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
WLL +R+ RN+ A ++ EL++AAKGS + AI+KK+E R+A++NR
Sbjct: 103 WLL-GASRKRPGRNM---AFKLSSELVDAAKGSGD--AIRKKEETHRMAEANR 149
>UniRef50_UPI0000DB7910 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S7 CG5108-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S7
CG5108-PA - Apis mellifera
Length = 216
Score = 34.3 bits (75), Expect = 3.4
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 545 WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
WL+ T + N + I++ +A E+I+AAK IKKK EL ++ ++NR
Sbjct: 161 WLIKTAQEKG---NTEKISDMLAKEIIDAAKNQGR--VIKKKQELHKLCEANR 208
>UniRef50_A4RPC8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 350
Score = 33.9 bits (74), Expect = 4.4
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Frame = +3
Query: 372 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGR-------AGTVRRQAVMFHPCAE 530
K ++ +H+ LV A ++ G R+D GR AGT R + + E
Sbjct: 214 KTQWDSVHVADLATLFVALVEAALDPGRRDDPELFGRAGYFFCEAGTPHRWSDVARAVVE 273
Query: 531 STKQSGFCAQVHVRL-------HSEILKQSQSVLQMN*LMQLRVHLT--PTPSKRRTSWS 683
+ KQ GF A+ + + +L SQSV + + R HL P SKR T W
Sbjct: 274 AAKQQGFVAEARAEVVPAAKVTNWTLLGNSQSVAE-----RARKHLAWEPEVSKRHTLWD 328
Query: 684 VLLN 695
+ N
Sbjct: 329 DIPN 332
>UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Bigelowiella natans|Rep: Chloroplast 30S ribosomal
protein S7 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 159
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 545 WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
WL +A N +I + ++ E++NA+ G AIKK+DE+ R+A++N+
Sbjct: 103 WLFQASKNKAG--NKYSIIKRLSSEIVNASNGMGE--AIKKRDEMHRMAEANK 151
>UniRef50_O96282 Cluster: Putative uncharacterized protein PFB0950w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0950w - Plasmodium falciparum
(isolate 3D7)
Length = 307
Score = 33.1 bits (72), Expect = 7.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 634 SCIN*FICNTLCDCFNISECSLTCTCAQKPDCLVDSA 524
SCI IC+ +C C I C +C C+ C+ SA
Sbjct: 215 SCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSA 251
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 300 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 473
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 474 IG 479
IG
Sbjct: 535 IG 536
>UniRef50_Q83ES8 Cluster: 30S ribosomal protein S7; n=11;
Bacteria|Rep: 30S ribosomal protein S7 - Coxiella
burnetii
Length = 161
Score = 33.1 bits (72), Expect = 7.8
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +2
Query: 581 RNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 703
RN KT+ +A E+++A +G AIKK++++ R+AK+N+
Sbjct: 116 RNEKTMVLRLAHEILDAVEGRGG--AIKKREDVHRMAKANQ 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,087,509
Number of Sequences: 1657284
Number of extensions: 14356255
Number of successful extensions: 38102
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 36104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37986
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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