Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30363
(471 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9NPE3 Cluster: H/ACA ribonucleoprotein complex subunit... 85 1e-15
UniRef50_Q9V5P6 Cluster: H/ACA ribonucleoprotein complex subunit... 75 6e-13
UniRef50_Q93XX8 Cluster: H/ACA ribonucleoprotein complex subunit... 69 7e-11
UniRef50_Q019V2 Cluster: H/ACA snoRNP complex, subunit NOP10; n=... 55 7e-07
UniRef50_Q2FPD6 Cluster: Nucleolar RNA-binding protein Nop10p; n... 46 6e-04
UniRef50_A6UUW5 Cluster: Nucleolar RNA-binding protein Nop10p; n... 44 0.002
UniRef50_Q97Z78 Cluster: Ribosome biogenesis protein Nop10; n=2;... 42 0.009
UniRef50_A2EP66 Cluster: Nucleolar RNA-binding protein, putative... 40 0.036
UniRef50_UPI0000498FA1 Cluster: conserved hypothetical protein; ... 38 0.084
UniRef50_Q8U1R4 Cluster: Ribosome biogenesis protein Nop10; n=7;... 36 0.34
UniRef50_A0B683 Cluster: Nucleolar RNA-binding protein Nop10p; n... 36 0.59
UniRef50_Q8TT00 Cluster: Ribosome biogenesis protein Nop10; n=7;... 36 0.59
UniRef50_A0Q1X6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_Q8ZTY6 Cluster: Ribosome biogenesis protein Nop10; n=4;... 33 2.4
UniRef50_Q86AK1 Cluster: Similar to Delayed Anaerobic Gene; Dan4... 31 9.7
UniRef50_Q23RK0 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_P81303 Cluster: Ribosome biogenesis protein Nop10; n=3;... 31 9.7
>UniRef50_Q9NPE3 Cluster: H/ACA ribonucleoprotein complex subunit 3;
n=25; Eukaryota|Rep: H/ACA ribonucleoprotein complex
subunit 3 - Homo sapiens (Human)
Length = 64
Score = 84.6 bits (200), Expect = 1e-15
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MYLRYYLNDKGDREYTLATIDPFGKPTLSAHPARFSPEDKYSRHRIIIKK 252
M+L+YYLN++GDR YTL DP G+ T SAHPARFSP+DKYSRHRI IKK
Sbjct: 1 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKK 50
>UniRef50_Q9V5P6 Cluster: H/ACA ribonucleoprotein complex subunit 3;
n=13; Eukaryota|Rep: H/ACA ribonucleoprotein complex
subunit 3 - Drosophila melanogaster (Fruit fly)
Length = 64
Score = 75.4 bits (177), Expect = 6e-13
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = +1
Query: 103 MYLRYYLNDKGDREYTLATIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKSLACCL 270
MYL Y +N+ GDR YTL G+PTLSAHPARFSPEDKYSR R+ IKK L
Sbjct: 1 MYLMYTINENGDRVYTLKKRTEDGRPTLSAHPARFSPEDKYSRQRLTIKKRFGLLL 56
>UniRef50_Q93XX8 Cluster: H/ACA ribonucleoprotein complex subunit
3-like protein; n=35; Eukaryota|Rep: H/ACA
ribonucleoprotein complex subunit 3-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 68.5 bits (160), Expect = 7e-11
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 103 MYLRYYLNDKGDREYTLATIDPFGKPTLSAHPARFSPEDKYSRHRIIIKK 252
MYL+ Y+N+KG++ YT P G T SAHPARFSP+DKYS+ R+++KK
Sbjct: 1 MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKK 50
>UniRef50_Q019V2 Cluster: H/ACA snoRNP complex, subunit NOP10; n=2;
Eukaryota|Rep: H/ACA snoRNP complex, subunit NOP10 -
Ostreococcus tauri
Length = 91
Score = 55.2 bits (127), Expect = 7e-07
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 13/62 (20%)
Frame = +1
Query: 106 YLRYYLNDKGDREYTLATID-------------PFGKPTLSAHPARFSPEDKYSRHRIII 246
YL YY ++KG+R YTL P G PT SAHPARFSP+DK+S+ R+ +
Sbjct: 16 YLMYYTDEKGERVYTLKVRSAKRRKPRAGDKTAPDGTPTHSAHPARFSPDDKFSKQRVAL 75
Query: 247 KK 252
KK
Sbjct: 76 KK 77
>UniRef50_Q2FPD6 Cluster: Nucleolar RNA-binding protein Nop10p; n=1;
Methanospirillum hungatei JF-1|Rep: Nucleolar
RNA-binding protein Nop10p - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 49
Score = 45.6 bits (103), Expect = 6e-04
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +1
Query: 136 DREYTLA-TIDPFGKPTLSAHPARFSPEDKYSRHRIIIK 249
D YTL+ T GKPT++ HPAR+SP+D+Y ++R +I+
Sbjct: 11 DNLYTLSETCSSCGKPTITPHPARYSPDDRYGKYRRMIR 49
>UniRef50_A6UUW5 Cluster: Nucleolar RNA-binding protein Nop10p; n=1;
Methanococcus aeolicus Nankai-3|Rep: Nucleolar
RNA-binding protein Nop10p - Methanococcus aeolicus
Nankai-3
Length = 51
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1
Query: 139 REYTLATIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKSL 258
+ YTL TI G+ T++ P R+SP DKY ++R ++KKS+
Sbjct: 10 KNYTLNTICQCGEKTITVKPPRYSPTDKYGKYRRMLKKSI 49
>UniRef50_Q97Z78 Cluster: Ribosome biogenesis protein Nop10; n=2;
Sulfolobus|Rep: Ribosome biogenesis protein Nop10 -
Sulfolobus solfataricus
Length = 56
Score = 41.5 bits (93), Expect = 0.009
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 136 DREYTLA-TIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKSL 258
D YT T G T+ HP+RFSPEDKY ++RI +KK +
Sbjct: 11 DNIYTFKDTCQICGSKTVIPHPSRFSPEDKYVKYRIELKKGI 52
>UniRef50_A2EP66 Cluster: Nucleolar RNA-binding protein, putative;
n=2; Trichomonas vaginalis G3|Rep: Nucleolar RNA-binding
protein, putative - Trichomonas vaginalis G3
Length = 83
Score = 39.5 bits (88), Expect = 0.036
Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 139 REYTLATIDP-FGKPTLSAHPARFSPEDKYSRHRIIIK 249
++YTL P G T SAHPARFSPEDK S RI K
Sbjct: 31 KQYTLKQKCPRCGGQTRSAHPARFSPEDKNSAERIQTK 68
>UniRef50_UPI0000498FA1 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 59
Score = 38.3 bits (85), Expect = 0.084
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 109 LRYYLNDKGDREYTLATIDPFGKPTL-SAHPARFSPEDKYSRHRIIIKK 252
L YY ++ ++YT+ T P + SAHPA+FSP D YS++RI KK
Sbjct: 2 LLYYCDNC--KQYTMKTECPQCNGYVRSAHPAKFSPVDPYSKYRIATKK 48
>UniRef50_Q8U1R4 Cluster: Ribosome biogenesis protein Nop10; n=7;
Archaea|Rep: Ribosome biogenesis protein Nop10 -
Pyrococcus furiosus
Length = 60
Score = 36.3 bits (80), Expect = 0.34
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 145 YTLATIDPF-GKPTLSAHPARFSPEDKYSRHR 237
YTL + P G+ T AHP RFSPED Y +R
Sbjct: 14 YTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYR 45
>UniRef50_A0B683 Cluster: Nucleolar RNA-binding protein Nop10p; n=1;
Methanosaeta thermophila PT|Rep: Nucleolar RNA-binding
protein Nop10p - Methanosaeta thermophila (strain DSM
6194 / PT) (Methanothrixthermophila (strain DSM 6194 /
PT))
Length = 60
Score = 35.5 bits (78), Expect = 0.59
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 139 REYTLATIDP-FGKPTLSAHPARFSPEDKYSRHR 237
R YTL P G T PARFSPED+Y R+R
Sbjct: 13 RLYTLKETCPRCGSHTTGTKPARFSPEDRYGRYR 46
>UniRef50_Q8TT00 Cluster: Ribosome biogenesis protein Nop10; n=7;
Euryarchaeota|Rep: Ribosome biogenesis protein Nop10 -
Methanosarcina acetivorans
Length = 51
Score = 35.5 bits (78), Expect = 0.59
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 145 YTLATIDPF-GKPTLSAHPARFSPEDKYSRHRIIIKK 252
YTL P G TL A PARFSP+D Y ++R + KK
Sbjct: 14 YTLREKCPVCGGVTLPAIPARFSPQDPYGKYRRLAKK 50
>UniRef50_A0Q1X6 Cluster: Putative uncharacterized protein; n=1;
Clostridium novyi NT|Rep: Putative uncharacterized
protein - Clostridium novyi (strain NT)
Length = 161
Score = 34.7 bits (76), Expect = 1.0
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -2
Query: 425 FVRAFVFCCMLYKSCVP*ILKIIVKMYQNLDHFGNFQ 315
++ AF+ + KSC P I ++IV++ NLD + NF+
Sbjct: 86 YMEAFMNYSLNIKSCYPNIYRVIVRLLMNLDKYENFE 122
>UniRef50_Q8ZTY6 Cluster: Ribosome biogenesis protein Nop10; n=4;
Archaea|Rep: Ribosome biogenesis protein Nop10 -
Pyrobaculum aerophilum
Length = 72
Score = 33.5 bits (73), Expect = 2.4
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 193 HPARFSPEDKYSRHRIIIK 249
HP +FSPEDKY ++RI+ K
Sbjct: 32 HPPKFSPEDKYQKYRILQK 50
>UniRef50_Q86AK1 Cluster: Similar to Delayed Anaerobic Gene; Dan4p;
n=2; Dictyostelium discoideum|Rep: Similar to Delayed
Anaerobic Gene; Dan4p - Dictyostelium discoideum (Slime
mold)
Length = 457
Score = 31.5 bits (68), Expect = 9.7
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -2
Query: 257 KLFLIIILCLEYLS-SGEKRAGCADNVGFPN 168
K+ +++I+C+ YLS S K G +DN G+PN
Sbjct: 2 KISILLIICIIYLSISNVKSYGESDNSGYPN 32
>UniRef50_Q23RK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 691
Score = 31.5 bits (68), Expect = 9.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 174 KTNIVSTSSSFFS*RQILKTQNNNQEEFGLLLTQ 275
K N+ +TS S Q +QNN+Q+ FG+++ Q
Sbjct: 551 KDNLSNTSKSSLKDEQFAASQNNSQKSFGIIVNQ 584
>UniRef50_P81303 Cluster: Ribosome biogenesis protein Nop10; n=3;
Archaea|Rep: Ribosome biogenesis protein Nop10 -
Methanococcus jannaschii
Length = 60
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 145 YTLATIDP-FGKPTLSAHPARFSPEDKYSRHRIIIKKSL 258
YTL I P G+ T+ P +FS ED++ ++R ++K++L
Sbjct: 15 YTLKEICPKCGEKTVIPKPPKFSLEDRWGKYRRMLKRAL 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,383,607
Number of Sequences: 1657284
Number of extensions: 7892379
Number of successful extensions: 16119
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16108
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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