Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30363
         (471 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-4|CAB02768.2|   64|Caenorhabditis elegans Hypothetical pr...    69   2e-12
AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical ...    31   0.55 
AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical ...    29   1.3  
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical ...    27   9.0  

>Z81038-4|CAB02768.2|   64|Caenorhabditis elegans Hypothetical
           protein C25A1.6 protein.
          Length = 64

 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +1

Query: 103 MYLRYYLNDKGDREYTLATIDPFGKPTLSAHPARFSPEDKYSRHRIIIKK 252
           M+LRY+L++   R YTL    P G+ TL+AHPARFSPEDK S++RIIIKK
Sbjct: 1   MFLRYFLDENQQRVYTLKRTAPSGEQTLTAHPARFSPEDKNSKYRIIIKK 50


>AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical
           protein Y71F9AR.3 protein.
          Length = 746

 Score = 30.7 bits (66), Expect = 0.55
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 145 YTLATIDPFGKPTLSAHPA--RFSPEDKYSRHRIIIKKSLACCLHNNLNLFIKINIDL 312
           +++   DP   P+ S +     FSP+ KY       + +++   ++ L  F+K N+DL
Sbjct: 53  HSMDRYDPTASPSFSTYAKCLGFSPDGKYMAFHSHARSAISVLRYSGLENFVKDNVDL 110


>AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical
           protein W04B5.2 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 431 IPFVRAFVFCCMLYKSCVP*ILKIIVKMYQNLDHFGNFQCKSIFILMNRFR 279
           I F+   +     YK C    L II  +  +L HF +  C++ F   N FR
Sbjct: 219 INFILFIIIIANKYKKCYKNFLLIIYSLLNSLTHFSSTNCEN-FEKKNSFR 268


>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
           protein F21C10.7 protein.
          Length = 2541

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 105 VSQVLLKXXXXXXVHISDDRPIWKTNIVSTSSSFFS*RQILKTQNNNQEEF 257
           + Q+  K      + I +D  IW+  +V    +     Q++ TQ+NNQE+F
Sbjct: 678 LDQLSQKVELTSLLKIVEDVQIWQEEMVEIIRNM---NQVVTTQSNNQEQF 725


>AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical
            protein C26G2.2 protein.
          Length = 952

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 115  YYLNDKGDREYTLATIDPFGKPTLSAHPARFSP 213
            +YL  KG  E     +D     TLS  P+ FSP
Sbjct: 916  FYLKKKGVLEQLFRKLDRMKCNTLSTQPSAFSP 948


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,307,367
Number of Sequences: 27780
Number of extensions: 205896
Number of successful extensions: 465
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)