BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30362 (732 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 30 1.6 >04_03_0961 + 21263735-21263773,21264157-21264279,21266774-21266847, 21266939-21267095,21267554-21267694,21267739-21267823, 21268810-21268903,21269041-21269239,21269515-21269549, 21270076-21270631,21270722-21270882,21271704-21271718, 21273078-21273330,21273439-21273562,21273688-21273788, 21274870-21274938,21275060-21275191,21275270-21275404, 21275489-21275551,21275636-21275881,21276007-21276285 Length = 1026 Score = 30.3 bits (65), Expect = 1.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +1 Query: 574 LDRFNCLRN*SNYYSDYCGHNIEIKY 651 L+ F L + NY D+C HN+ KY Sbjct: 752 LEHFTALEHLDNYRCDHCWHNVAAKY 777 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,583,240 Number of Sequences: 37544 Number of extensions: 270245 Number of successful extensions: 407 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 399 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 407 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1921741964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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