Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30359
(697 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 109 6e-23
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 107 3e-22
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 94 3e-18
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 84 4e-15
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 83 8e-15
UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62; Fungi/... 79 8e-14
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 79 1e-13
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 78 2e-13
UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n... 76 7e-13
UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55; Euka... 73 7e-12
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 72 2e-11
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 71 2e-11
UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29; Euka... 71 3e-11
UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1; B... 69 1e-10
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 66 6e-10
UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5; ... 66 8e-10
UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n... 65 1e-09
UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2; Cryptos... 65 2e-09
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 64 2e-09
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 64 2e-09
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 64 4e-09
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 62 1e-08
UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative... 62 2e-08
UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3; ... 55 2e-06
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 55 2e-06
UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1; Encepha... 53 8e-06
UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1; A... 52 1e-05
UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, wh... 52 1e-05
UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=... 51 2e-05
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 50 7e-05
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 48 3e-04
UniRef50_Q9UZJ7 Cluster: 50S ribosomal protein L34e; n=8; Archae... 47 4e-04
UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3; ... 45 0.002
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 44 0.003
UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3; Archae... 43 0.006
UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilu... 41 0.025
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 40 0.058
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 40 0.077
UniRef50_Q8ZTJ2 Cluster: 50S ribosomal protein L34e; n=3; Pyroba... 39 0.13
UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3; Methan... 38 0.18
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 27 0.97
UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiell... 36 1.3
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 36 1.3
UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 34 2.9
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 34 2.9
UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q5EBN2 Cluster: Putative tripartite motif-containing pr... 33 5.1
UniRef50_Q9VBH6 Cluster: CG14551-PA; n=2; Sophophora|Rep: CG1455... 33 8.8
UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4; Thermo... 33 8.8
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 33 8.8
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 109 bits (262), Expect = 6e-23
Identities = 45/62 (72%), Positives = 58/62 (93%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
LLGRLA+V+AK LL+G KV +VRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHFR
Sbjct: 17 LLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFR 76
Query: 690 AP 695
AP
Sbjct: 77 AP 78
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 107 bits (257), Expect = 3e-22
Identities = 46/62 (74%), Positives = 56/62 (90%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
LLGRLA+VIAK +L G KVV+VRCE + +SG+FFRNK+K +++LRKRCNVNPARGPFHFR
Sbjct: 17 LLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKRCNVNPARGPFHFR 76
Query: 690 AP 695
AP
Sbjct: 77 AP 78
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 93.9 bits (223), Expect = 3e-18
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
LLGRLAA +AK LL G +VV VR E+INISG+ FRNKLK +FL+KR N NP RGPFHFR
Sbjct: 14 LLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFR 73
Query: 690 AP 695
+P
Sbjct: 74 SP 75
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
+LGR AAV+AK LL G K+ +VRCEQ+NI+G RNK+K + +LRKR NP +GPFH R
Sbjct: 33 VLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNPTKGPFHHR 92
Query: 690 AP 695
AP
Sbjct: 93 AP 94
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 82.6 bits (195), Expect = 8e-15
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
+LGRL++++AK LL G +VV+VRCE+I +SG R K+K + FLRKR N P+ GP HFR
Sbjct: 20 MLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 79
Query: 690 AP 695
AP
Sbjct: 80 AP 81
>UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62;
Fungi/Metazoa group|Rep: 60S ribosomal protein L34 -
Homo sapiens (Human)
Length = 117
Score = 79.4 bits (187), Expect = 8e-14
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKFRGIQPAR 268
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C + RG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 267 P 265
P
Sbjct: 61 P 61
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -1
Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 131
RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 66 RLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
LLG LAA +AK +L G KVV+V E INISGNF+RNKLK ++FL K+ N NP+RGP+ F+
Sbjct: 15 LLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNTNPSRGPYRFQ 73
Query: 690 AP 695
AP
Sbjct: 74 AP 75
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
LLGRLA+ +AK LL G ++V+VR E INISG+ FRN++K FL K N NP RG HFR
Sbjct: 86 LLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMNHNPRRGVQHFR 145
Query: 690 AP 695
AP
Sbjct: 146 AP 147
>UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L34e - Antonospora locustae (Nosema locustae)
Length = 113
Score = 76.2 bits (179), Expect = 7e-13
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
MVQ LT R R +YN SNQ++I RTPG R VY KKP ++P+C +C+SK RGI RPA
Sbjct: 1 MVQHLTHRGRRTYNNASNQKKIRRTPGNRRVYIPKKKPGRVPKCVKCRSKLRGIDICRPA 60
Query: 261 ERSVFATVRK 232
FA +RK
Sbjct: 61 ---AFARLRK 67
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = -1
Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV 140
RL ++TV R YGG LC C++ RI+ AFL E++++
Sbjct: 64 RLRKSQRTVARTYGGNLCGSCLENRILDAFLSAEEQLL 101
>UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55;
Eukaryota|Rep: 60S ribosomal protein L34-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 121
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
M QR+TFRRR YNT+SN+ ++V+TPGG L Q+VKK P+CG C S +GI RP
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60
Query: 261 ERSVFATVRK 232
+ +ATV K
Sbjct: 61 Q---YATVSK 67
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = -1
Query: 235 KTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137
KTV R YGG C CVK+RI+RAFLIEEQKIVK
Sbjct: 70 KTVSRAYGGSRCANCVKERIIRAFLIEEQKIVK 102
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/62 (46%), Positives = 45/62 (72%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
LLGR+A++ AK +L+G+K++++R E +I+G RN K S +K+ N NP RGPFHF+
Sbjct: 12 LLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNTNPRRGPFHFK 71
Query: 690 AP 695
+P
Sbjct: 72 SP 73
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
+LGRL+A++AK LL G++V LVRCE+ ISG F K + + KR N N RGPFHFR
Sbjct: 12 ILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNHLRGPFHFR 71
Query: 690 AP 695
AP
Sbjct: 72 AP 73
>UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29;
Eukaryota|Rep: 60S ribosomal protein L34-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 120
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
MVQRL +R R SY TKSNQ RIV+TPGG+LVYQ KK P+C + +GI RP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 261 E 259
E
Sbjct: 61 E 61
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -1
Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137
RL ++TV R YGGVL V++RI+RAFL+EEQKIVK
Sbjct: 66 RLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVK 104
>UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L34, putative -
Babesia bovis
Length = 157
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARP 265
MVQR+ RR YNT+SN++R V+TPGGRLV Q K + P+CG CK K GI RP
Sbjct: 1 MVQRVVLRRHCRYNTRSNKQRKVKTPGGRLVVQRRVKVAQGPKCGDCKCKLAGIPALRP 59
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1
Query: 241 RKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137
R++ V R YGGV CHKCVK RI+RAFL EEQK +K
Sbjct: 68 RERRVSRAYGGVRCHKCVKDRIIRAFLKEEQKALK 102
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
+LGR+A+V+AK LL G K+VLVRCE + + G ++ + RKR N NP RG FH R
Sbjct: 20 VLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRVNTNPTRGAFHHR 79
Query: 690 AP 695
+P
Sbjct: 80 SP 81
>UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L34e, putative -
Plasmodium yoelii yoelii
Length = 164
Score = 66.1 bits (154), Expect = 8e-10
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
M QR+ +R+ YNTKSN+ R +RTPGG+L +KK P+C CK+ +G++ RPA
Sbjct: 1 MAQRVHYRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPKCADCKNPIQGVKALRPA 60
Query: 261 E 259
+
Sbjct: 61 D 61
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/76 (39%), Positives = 38/76 (50%)
Frame = -1
Query: 364 GWPLGLSVCKKAQEDPKVWSVQEQIPWYPAS*TC*TFRLCYRKKTVKRVYGGVLCHKCVK 185
G L + V KK PK + I A R + + V R YGG +C KC K
Sbjct: 27 GGKLTIHVIKKKAGKPKCADCKNPIQGVKALRPADNQRARKKDRKVSRAYGGSICAKCXK 86
Query: 184 QRIVRAFLIEEQKIVK 137
+RI+RAFL EEQK V+
Sbjct: 87 ERIMRAFLFEEQKCVR 102
>UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n=4;
Eukaryota|Rep: 60S ribosomal protein L34a, putative -
Theileria parva
Length = 138
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARP 265
MVQR+ +RRR Y T SN + VRTPG RLV +KK K PRCG CK G+ RP
Sbjct: 1 MVQRVHYRRRNKYKTPSNVVKRVRTPGARLVLHNLKKVGKRPRCGDCKRTLAGVSAVRP 59
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 241 RKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137
R +TV R YGG CH CVK RI+RAFL EEQK V+
Sbjct: 68 RNRTVSRPYGGSRCHNCVKDRIIRAFLKEEQKCVR 102
>UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L34 -
Cryptosporidium parvum Iowa II
Length = 138
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = -2
Query: 444 KMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARP 265
KM R+T+RR+ YNT SN+ R+V+TPGGR + Q + K P+CG CK GI P
Sbjct: 3 KMSPRVTYRRKCRYNTPSNRVRVVKTPGGRNLIQNIGKVYSRPKCGDCKKPLAGIPACAP 62
Query: 264 AE 259
E
Sbjct: 63 YE 64
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = -1
Query: 334 KAQEDPKVWSVQEQIPWYPAS*TC*TFRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIE 155
K PK ++ + PA L R++TV R YGG C CV+QRI+RAFL+E
Sbjct: 40 KVYSRPKCGDCKKPLAGIPACAPYEMKHLKKRERTVARAYGGTKCPTCVRQRILRAFLLE 99
Query: 154 EQKIVK 137
EQK+VK
Sbjct: 100 EQKVVK 105
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = +3
Query: 516 GRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAP 695
GRLAA +AK LL+G KVV+VRCE+I ++G FL K N NP GPFH RAP
Sbjct: 15 GRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNPRDGPFHQRAP 74
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +3
Query: 516 GRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAP 695
G+LAA +AK+LLEG +V +V E+ G+ R K +L KRC VNP RGPFHFR P
Sbjct: 17 GKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNPRRGPFHFREP 76
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 686
+LGRLA+++AK L + LVRCE+I ISG R K+K M FLR+R N P+ GP F
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
L GRLA++++K LL+G VV+VR E I +SG R ++ + KR N NP +GP+H+
Sbjct: 13 LFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMNTNPKKGPYHYT 72
Query: 690 AP 695
+P
Sbjct: 73 SP 74
>UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative;
n=10; Eukaryota|Rep: Ribosomal protein L34 protein,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 192
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = -2
Query: 438 VQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAE 259
+ R F R YNT+SN+ RI++TPGG L Y ++KK P+CG C K GI RP E
Sbjct: 81 IDRFLFYR---YNTRSNKVRIIKTPGGELRYLHIKKKGTAPKCGDCGIKLPGIPALRPRE 137
Query: 258 RSVFATVRK 232
S + +K
Sbjct: 138 YSQISRPKK 146
Score = 59.3 bits (137), Expect = 9e-08
Identities = 37/79 (46%), Positives = 41/79 (51%)
Frame = -1
Query: 373 KDTGWPLGLSVCKKAQEDPKVWSVQEQIPWYPAS*TC*TFRLCYRKKTVKRVYGGVLCHK 194
K G L KK PK ++P PA ++ KKTV R YGG C
Sbjct: 100 KTPGGELRYLHIKKKGTAPKCGDCGIKLPGIPALRPREYSQISRPKKTVSRAYGGSRCAG 159
Query: 193 CVKQRIVRAFLIEEQKIVK 137
CVK RIVRAFLIEEQKIVK
Sbjct: 160 CVKDRIVRAFLIEEQKIVK 178
>UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L34 - Entamoeba histolytica HM-1:IMSS
Length = 137
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = -2
Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARP 265
M R+T+ R+ SYNTKSN RIV+T GG + Q+ +K RCG C GI+ RP
Sbjct: 1 MAVRVTYVRKHSYNTKSNGIRIVKTAGGNMTVQHRQKISNGVRCGDCGCVLAGIRHIRP 59
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -1
Query: 238 KKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 134
K+TV R YGGV CHKCV+++I+RAFLI E ++K+
Sbjct: 69 KRTVTRAYGGVRCHKCVQKKILRAFLINEHNLIKL 103
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
+ GRLA+ +AK+LLEGN+V ++ CE++ ISG + FL+ ++P GP+H R
Sbjct: 8 IAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPEHGPYHPR 67
Query: 690 AP 695
P
Sbjct: 68 RP 69
>UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L34
- Encephalitozoon cuniculi
Length = 110
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = -2
Query: 438 VQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAE 259
++ + + +Y T+SN+RR VRTP G+LV + VKK K RC +C + I RPAE
Sbjct: 1 MKNVLIHKGATYKTRSNRRRKVRTPSGKLVNRRVKKHSKKHRCHECNAILGSIARMRPAE 60
Query: 258 RS 253
S
Sbjct: 61 FS 62
Score = 36.7 bits (81), Expect = 0.54
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 235 KTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV 140
+ V R YG C +CV+++I+ AFL E++IV
Sbjct: 69 RRVNRPYGATTCGRCVREKIISAFLGNEERIV 100
>UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1;
Aedes aegypti|Rep: Ribosomal protein L34, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 123
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = -1
Query: 250 LCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 131
+C KTV R +GGV+CH+ +RI+RAFLI+EQK+VKVL
Sbjct: 60 MCRCLKTVIRTFGGVICHR---ERIIRAFLIDEQKVVKVL 96
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -2
Query: 414 RLSYNTKSNQRRIVRTPGG-RLVYQYVKKPKKIPRCGQCKSK 292
++SYNT N+RR+VRT G RLVY ++KK + + +C QCK +
Sbjct: 9 KMSYNT--NKRRVVRTLGSDRLVYLFIKKQRIVSKCCQCKGE 48
>UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 108
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -2
Query: 432 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSK--FRGIQPARPAE 259
R+T+RRR SYNT+SN+ R V+TPGG +V QY K C G++ RP +
Sbjct: 4 RITYRRRTSYNTRSNKIRKVKTPGGNVVVQYPNKKTSASTCADSNLNVVLNGLKRIRPTK 63
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = -1
Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137
+L R++TV R YGGVL +K RI+RAFL+EE KIVK
Sbjct: 66 QLARRQRTVSRPYGGVLSAGALKNRIIRAFLVEEVKIVK 104
>UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L34,
putative - Leishmania major
Length = 168
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -1
Query: 253 RLCYR-KKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137
RL R +K+V R YGGVL H V+ R+VRAFL+EEQ+IVK
Sbjct: 66 RLASRHEKSVSRAYGGVLSHDQVRDRVVRAFLVEEQRIVK 105
Score = 38.7 bits (86), Expect = 0.13
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -2
Query: 432 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQ 343
R+ +RRR+ Y T+ N+ ++VRTPG +LV Q
Sbjct: 5 RVQYRRRMHYATRGNRMKMVRTPGNKLVMQ 34
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
+ GRL++ +AK+L +G++V +V CE+I SG + FL +NP GP H+R
Sbjct: 22 IAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINSIINPKHGPVHYR 81
Query: 690 AP 695
P
Sbjct: 82 RP 83
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGN--FFRNKLKLMSFLRKRCNVNPARGPFH 683
+LGRLA+ +AK+LLEG +VV+V E+ I+GN +K K + LR NP RGPF+
Sbjct: 10 ILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTL--TNPRRGPFY 67
>UniRef50_Q9UZJ7 Cluster: 50S ribosomal protein L34e; n=8;
Archaea|Rep: 50S ribosomal protein L34e - Pyrococcus
abyssi
Length = 91
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -2
Query: 405 YNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAERSVFATVRKQ 229
Y ++S +R+ VRTPGGR+V + ++ KI C C GI RP E +K+
Sbjct: 5 YRSRSWRRKYVRTPGGRVVIHFERRKPKIAHCAICGRPLNGIPRGRPVEMRKLPKTKKR 63
>UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein L34e,
putative - Trichomonas vaginalis G3
Length = 116
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -2
Query: 432 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAE 259
R T RR L ++T N+ VRTPG +LV Y+ K + P C + + GI+ + E
Sbjct: 5 RYTLRRSLGFHTIRNRVAPVRTPGNKLVAHYIAKRQNGPHCAETGKRINGIKCVKTCE 62
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -1
Query: 334 KAQEDPKVWSVQEQIPWYPAS*TC*TFRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIE 155
K Q P ++I TC R+ ++TV R YGGV C VK RI+ AF+ E
Sbjct: 38 KRQNGPHCAETGKRINGIKCVKTCELRRMKKNQRTVSRPYGGVYCGAVVKDRIINAFMEE 97
Query: 154 E 152
E
Sbjct: 98 E 98
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/63 (36%), Positives = 42/63 (66%)
Frame = +3
Query: 507 SLLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 686
++LGRLA+V+AK +L+G ++ ++ E+ I+G +N +K +L+K +P +GPF+
Sbjct: 23 AVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPKKGPFYP 79
Query: 687 RAP 695
R P
Sbjct: 80 RRP 82
>UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3;
Archaea|Rep: 50S ribosomal protein L34e - Methanopyrus
kandleri
Length = 113
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 405 YNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAE 259
Y ++S +R RTPGGR V + KK P+CG C + G+ R E
Sbjct: 6 YRSRSCRRVYKRTPGGRTVIHFEKKIPNWPKCGACGRRLNGVMRGRNVE 54
>UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L34e - Thermofilum
pendens (strain Hrk 5)
Length = 91
Score = 41.1 bits (92), Expect = 0.025
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -2
Query: 414 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGI 280
R + ++S +R++VRTPGGRL + K P+C C +G+
Sbjct: 3 RPALRSRSKKRKLVRTPGGRLALHVIDKKHDYPKCAICGRPIQGV 47
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 39.9 bits (89), Expect = 0.058
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLK-LMSFLRKRCNVNP-ARGPFH 683
+ GRLA+V+AK LL+G++VV+V E+I I+G R K L ++ + NP RGP +
Sbjct: 16 IAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRWVEWKTYYNPELRGPKY 75
Query: 684 FRAP 695
+ P
Sbjct: 76 PKTP 79
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 39.5 bits (88), Expect = 0.077
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
L+GRLA+ I +L +G + ++RC+ + SG + +++ + NP +GP+ F
Sbjct: 13 LIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRTNPNKGPYFFS 72
Query: 690 AP 695
P
Sbjct: 73 NP 74
>UniRef50_Q8ZTJ2 Cluster: 50S ribosomal protein L34e; n=3;
Pyrobaculum|Rep: 50S ribosomal protein L34e -
Pyrobaculum aerophilum
Length = 84
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 414 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRC 310
R +Y ++S +R V+TPGGR V Y K+ K +P+C
Sbjct: 3 RPAYRSRSVRRIKVKTPGGRTVIHYEKRAKGVPKC 37
>UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L34e -
Methanobacterium thermoautotrophicum
Length = 88
Score = 38.3 bits (85), Expect = 0.18
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -2
Query: 411 LSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAERSVFATVRK 232
L Y ++S +R +TPGGR V Y +K C C G+ RP E + +K
Sbjct: 4 LRYRSRSYKRIFKKTPGGRTVTHYRRKKPSKHVCAGCGKPLHGVPRGRPYEIRKLSKSKK 63
Query: 231 Q*N 223
+ N
Sbjct: 64 RPN 66
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 27.5 bits (58), Expect(2) = 0.97
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVV 569
+L RLA++IAK LL G +VV
Sbjct: 20 MLSRLASIIAKELLNGKRVV 39
Score = 27.5 bits (58), Expect(2) = 0.97
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 648 RCNVNPARGPFHFRAP 695
R N P+ GP HFR+P
Sbjct: 40 RMNTKPSHGPIHFRSP 55
>UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiella
natans|Rep: Ribosomal protein L34 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 90
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -2
Query: 432 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRC 310
R+T ++R +Y T SN+ I + GG+ V +Y+KK + +C
Sbjct: 2 RITLKKRKTYKTNSNKFIIKKILGGKYVAKYIKKLRTSNKC 42
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGN 605
++GRLA+V+AK+LL G +V +V E+I +SG+
Sbjct: 19 IMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD 50
>UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 97
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 378 IVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGI 280
+++TPG + Y ++KK IPRCG +GI
Sbjct: 26 VIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGI 58
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1
Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 164
RL + KKTV+R YGG L V+ IVRAF
Sbjct: 68 RLSHNKKTVQRAYGGCLSANAVRS-IVRAF 96
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 507 SLLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPAR-GPFH 683
+++GRLA+ +AK+ L G ++ +V E+ ++GN K + ++ NP + GP +
Sbjct: 9 AVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNPKKMGPKY 68
Query: 684 FRAP 695
R P
Sbjct: 69 PRRP 72
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
+LGRL++ IAK LL G ++V+V E+ I+G+ + + + K + +GP+ R
Sbjct: 25 ILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKY---MVFERYKEKYDRGSKEKGPYFPR 81
Query: 690 AP 695
P
Sbjct: 82 HP 83
>UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 106
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 688 LKWKGPRAGFTLHLLRRNDISLSLFLKKLPEMLICSQRTKTTLFPSRR 545
L+W+ R+G + + + +S S F+KK+P + SQ T P RR
Sbjct: 23 LEWRACRSGESPYKFQSLSVSRSKFIKKVPSGRVISQSTSAFWLPFRR 70
>UniRef50_Q5EBN2 Cluster: Putative tripartite motif-containing
protein 61; n=1; Homo sapiens|Rep: Putative tripartite
motif-containing protein 61 - Homo sapiens (Human)
Length = 209
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -1
Query: 610 KKLPEMLICSQRTKTTLFPSRRTLAMTAARRP-SRDHGHRSLWPYC*SPSFSLKKLENGA 434
K+ E +C + + F ++ L + R S DH H +WP + S+ KKLE
Sbjct: 89 KRQEEKHVCKKHNQVLTFFCQKDLELLCPRCSLSTDHQHHCVWPIKKAASYHRKKLEEYN 148
Query: 433 AAYIQATTVVQHKI 392
A + + +++ I
Sbjct: 149 APWKERVELIEKVI 162
>UniRef50_Q9VBH6 Cluster: CG14551-PA; n=2; Sophophora|Rep:
CG14551-PA - Drosophila melanogaster (Fruit fly)
Length = 201
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 372 RTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAERSVFATVRKQ*N 223
+ P G L+Y + KP + RC C + A P +R+ +A RK N
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKSWN 164
>UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L34e - Aeropyrum
pernix
Length = 95
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 414 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARP 265
R ++S +R RTPGG V Y ++ RC +C G+ RP
Sbjct: 8 RPGLRSRSLRRVYRRTPGGSTVVHYERRKPGPARCARCGRPLGGVPRGRP 57
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISG 602
+LGR+A+ + ++L EG KV++V E+ ISG
Sbjct: 18 ILGRMASNVVRLLKEGKKVIIVNGEKAVISG 48
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,631,432
Number of Sequences: 1657284
Number of extensions: 13500598
Number of successful extensions: 37529
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 36263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37513
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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