BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30359 (697 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0071 - 522920-523063,524125-524212,524289-524677 83 2e-16 03_06_0010 + 30990002-30990273,30990372-30990488,30990581-309906... 83 2e-16 08_02_0790 - 21214282-21214369,21214455-21214564,21215478-212155... 81 1e-15 08_01_0372 + 3286861-3286939,3287220-3287299,3289041-3289150,328... 81 1e-15 09_04_0106 - 14636773-14636863,14636948-14637057,14638107-146381... 79 3e-15 04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 29 3.5 02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225 29 3.5 01_07_0169 + 41650339-41651217 29 3.5 05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 28 6.2 >07_01_0071 - 522920-523063,524125-524212,524289-524677 Length = 206 Score = 83.0 bits (196), Expect = 2e-16 Identities = 36/62 (58%), Positives = 47/62 (75%) Frame = +3 Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689 +LGRLA+++AK LL G +VV+VRCE++ ISG R K+K + FLRKR N P+ GP HFR Sbjct: 20 MLGRLASLVAKELLNGQRVVVVRCEEMCISGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 79 Query: 690 AP 695 AP Sbjct: 80 AP 81 >03_06_0010 + 30990002-30990273,30990372-30990488,30990581-30990668, 30991505-30991648 Length = 206 Score = 83.0 bits (196), Expect = 2e-16 Identities = 36/62 (58%), Positives = 47/62 (75%) Frame = +3 Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689 +LGRLA++IAK LL G +VV+VRCE+I +SG R K+K + FLRKR N P+ GP HFR Sbjct: 20 MLGRLASIIAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 79 Query: 690 AP 695 +P Sbjct: 80 SP 81 >08_02_0790 - 21214282-21214369,21214455-21214564,21215478-21215557, 21215659-21215737 Length = 118 Score = 80.6 bits (190), Expect = 1e-15 Identities = 38/61 (62%), Positives = 44/61 (72%) Frame = -2 Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262 MVQRLT+R+R SY TKSNQ R+V+TPGGRLVYQY KK P+C K +GI RPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60 Query: 261 E 259 E Sbjct: 61 E 61 Score = 52.4 bits (120), Expect = 3e-07 Identities = 24/39 (61%), Positives = 30/39 (76%) Frame = -1 Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137 RL ++TV R YGGVL V++RI+RAFL+EEQKIVK Sbjct: 66 RLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104 >08_01_0372 + 3286861-3286939,3287220-3287299,3289041-3289150, 3289224-3289311 Length = 118 Score = 80.6 bits (190), Expect = 1e-15 Identities = 38/61 (62%), Positives = 44/61 (72%) Frame = -2 Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262 MVQRLT+R+R SY TKSNQ R+V+TPGGRLVYQY KK P+C K +GI RPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60 Query: 261 E 259 E Sbjct: 61 E 61 Score = 52.4 bits (120), Expect = 3e-07 Identities = 24/39 (61%), Positives = 30/39 (76%) Frame = -1 Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137 RL ++TV R YGGVL V++RI+RAFL+EEQKIVK Sbjct: 66 RLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104 >09_04_0106 - 14636773-14636863,14636948-14637057,14638107-14638186, 14638302-14638380 Length = 119 Score = 79.4 bits (187), Expect = 3e-15 Identities = 37/61 (60%), Positives = 44/61 (72%) Frame = -2 Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262 MVQRLT+R+R SY TKSNQ R+V+TPGG+LVYQY KK P+C K +GI RPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60 Query: 261 E 259 E Sbjct: 61 E 61 Score = 52.4 bits (120), Expect = 3e-07 Identities = 24/39 (61%), Positives = 30/39 (76%) Frame = -1 Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 137 RL ++TV R YGGVL V++RI+RAFL+EEQKIVK Sbjct: 66 RLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104 >04_03_0937 + 20923705-20923833,20924001-20924012,20924413-20924473, 20924523-20924749,20924859-20925104,20925645-20925657, 20927681-20928302,20928320-20928949,20928960-20929224 Length = 734 Score = 29.1 bits (62), Expect = 3.5 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +2 Query: 467 RALAIRP**SMAVVSAGPSGGSHRQGPSRREQSCFGSLRTNQHLWQLL*EQTQAY 631 R + P S A ++G +GG H + R SC R +HL+ +L + + Y Sbjct: 235 RTMCSPPSRSRAYAASGGTGGGHYRSRCLRSCSCDEHSRRRRHLYLVLDDWKEGY 289 >02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225 Length = 489 Score = 29.1 bits (62), Expect = 3.5 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 242 VAKTERSAGLAGWIPRNLLLH*PHLGIFL 328 V +T+ LA W P+ L+L P +G+FL Sbjct: 352 VGETKERGVLASWCPQELVLSHPSVGLFL 380 >01_07_0169 + 41650339-41651217 Length = 292 Score = 29.1 bits (62), Expect = 3.5 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 Query: 584 FAANQNNFVPFEKDLGDDCRQTAQQRPRPSITMALLLKP 468 FAA+ +N + + L D R+ +RPRP T L+ KP Sbjct: 232 FAASVDNARAYNQGLIDHVRRGTPRRPRPLETYTLVEKP 270 >05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 Length = 297 Score = 28.3 bits (60), Expect = 6.2 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 Query: 521 SGGSHRQGPSRREQSCFGSLRTNQHL 598 SGG HR+ SRR G L TN+ L Sbjct: 270 SGGEHRRKTSRRRSLIIGWLTTNKQL 295 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,887,036 Number of Sequences: 37544 Number of extensions: 391524 Number of successful extensions: 1083 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1082 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1780264028 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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