Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30359
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...   111   9e-25
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...   111   9e-25
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...   111   9e-25
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...   110   2e-24
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...   110   2e-24
AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p pro...   109   4e-24
AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB ...   109   4e-24
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...   107   1e-23
AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-P...    33   0.49 
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    31   1.1  
AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-P...    29   4.6  
BT022568-1|AAY54984.1|  530|Drosophila melanogaster IP11904p pro...    29   6.0  
BT022428-1|AAY54844.1|  511|Drosophila melanogaster IP11704p pro...    29   6.0  
AE014134-2939|AAF53673.2|  530|Drosophila melanogaster CG10178-P...    29   6.0  

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score =  111 bits (267), Expect = 9e-25
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = -2

Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK K +GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 261 ER 256
           ER
Sbjct: 61  ER 62



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 131
           R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 64  RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score =  111 bits (267), Expect = 9e-25
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = -2

Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK K +GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 261 ER 256
           ER
Sbjct: 61  ER 62



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 131
           R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 64  RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score =  111 bits (267), Expect = 9e-25
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = -2

Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK K +GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 261 ER 256
           ER
Sbjct: 61  ER 62



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 131
           R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 64  RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score =  110 bits (265), Expect = 2e-24
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -2

Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK K  GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 261 ER 256
           ER
Sbjct: 61  ER 62



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 131
           R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 64  RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score =  110 bits (265), Expect = 2e-24
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -2

Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK K  GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 261 ER 256
           ER
Sbjct: 61  ER 62



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 253 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVL 131
           R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 64  RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p
           protein.
          Length = 205

 Score =  109 bits (262), Expect = 4e-24
 Identities = 45/62 (72%), Positives = 58/62 (93%)
 Frame = +3

Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
           LLGRLA+V+AK LL+G KV +VRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHFR
Sbjct: 17  LLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFR 76

Query: 690 AP 695
           AP
Sbjct: 77  AP 78


>AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB
           protein.
          Length = 205

 Score =  109 bits (262), Expect = 4e-24
 Identities = 45/62 (72%), Positives = 58/62 (93%)
 Frame = +3

Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
           LLGRLA+V+AK LL+G KV +VRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHFR
Sbjct: 17  LLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFR 76

Query: 690 AP 695
           AP
Sbjct: 77  AP 78


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score =  107 bits (257), Expect = 1e-23
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -2

Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK K  GI  +RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60

Query: 261 ER 256
           ER
Sbjct: 61  ER 62



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 36/69 (52%), Positives = 44/69 (63%)
 Frame = -1

Query: 337 KKAQEDPKVWSVQEQIPWYPAS*TC*TFRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 158
           KK    P+    +E++    AS      R+  R KTV R YGGVLCH C+++RIVRAFLI
Sbjct: 36  KKNPTVPRCGQCKEKLHGITASRPSERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLI 95

Query: 157 EEQKIVKVL 131
           EEQKIVK L
Sbjct: 96  EEQKIVKAL 104


>AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-PA
           protein.
          Length = 201

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2

Query: 372 RTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARPAERSVFATVRKQ*N 223
           + P G L+Y  + KP  + RC  C       + A P +R+ +A  RK  N
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKSWN 164


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
           protein.
          Length = 2898

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 279 GYHG-ICSCTDHTLGSSWAFLHTD 347
           GY G +C  +DH  GSSW +L TD
Sbjct: 204 GYSGRLCDLSDHPAGSSWRWLATD 227


>AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-PA
            protein.
          Length = 1436

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -2

Query: 513  AETTAIDHYGLIAKA--RHFHSKSLKMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQY 340
            A ++ +D Y  + +   R +  +++ +++  T     S    S QRR  RTP G  ++ Y
Sbjct: 1310 AGSSHLDGYATLGRRSLRPYDHRTMSLLEPPTSSSSRSGEGVSYQRREARTPNGFCIFCY 1369

Query: 339  VKKPKK 322
              K KK
Sbjct: 1370 YSKRKK 1375


>BT022568-1|AAY54984.1|  530|Drosophila melanogaster IP11904p
           protein.
          Length = 530

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = -1

Query: 535 MTAARRPSRDHGHRSLWPYC*SPSFSLKKLENGAAAYIQATTVVQHKIKSKKNSKDTGWP 356
           +T+       H H +L     SPSF + K       +     +   +  S  N+ +  W 
Sbjct: 56  VTSVNNHPTKHPHENLTEIIISPSFDIPK-------HFPKENIFSMQFVSDFNNLELWWT 108

Query: 355 LGLSVCKKAQEDPKV 311
           +GL   + A +DPKV
Sbjct: 109 IGLMTTEHAFKDPKV 123


>BT022428-1|AAY54844.1|  511|Drosophila melanogaster IP11704p
           protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = -1

Query: 535 MTAARRPSRDHGHRSLWPYC*SPSFSLKKLENGAAAYIQATTVVQHKIKSKKNSKDTGWP 356
           +T+       H H +L     SPSF + K       +     +   +  S  N+ +  W 
Sbjct: 37  VTSVNNHPTKHPHENLTEIIISPSFDIPK-------HFPKENIFSMQFVSDFNNLELWWT 89

Query: 355 LGLSVCKKAQEDPKV 311
           +GL   + A +DPKV
Sbjct: 90  IGLMTTEHAFKDPKV 104


>AE014134-2939|AAF53673.2|  530|Drosophila melanogaster CG10178-PA
           protein.
          Length = 530

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = -1

Query: 535 MTAARRPSRDHGHRSLWPYC*SPSFSLKKLENGAAAYIQATTVVQHKIKSKKNSKDTGWP 356
           +T+       H H +L     SPSF + K       +     +   +  S  N+ +  W 
Sbjct: 56  VTSVNNHPTKHPHENLTEIIISPSFDIPK-------HFPKENIFSMQFVSDFNNLELWWT 108

Query: 355 LGLSVCKKAQEDPKV 311
           +GL   + A +DPKV
Sbjct: 109 IGLMTTEHAFKDPKV 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,215,082
Number of Sequences: 53049
Number of extensions: 642598
Number of successful extensions: 2115
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2115
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)