Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30359
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-2|CAA86515.1|  202|Caenorhabditis elegans Hypothetical pr...   101   5e-22
U31528-1|AAA74904.1|  202|Caenorhabditis elegans 60S ribosomal p...   101   5e-22
CU457741-15|CAM36357.1|  110|Caenorhabditis elegans Hypothetical...    81   7e-16
AF016425-4|AAB65339.1|  518|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z48334-6|CAA88313.1|  655|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    28   7.3  
AF314467-1|AAG41979.1|  655|Caenorhabditis elegans APC6 protein.       28   7.3  
AC024876-7|AAF60890.4|  211|Caenorhabditis elegans Hypothetical ...    28   7.3  
U53335-6|AAA96171.2|  518|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z46381-2|CAA86515.1|  202|Caenorhabditis elegans Hypothetical
           protein M01F1.2 protein.
          Length = 202

 Score =  101 bits (242), Expect = 5e-22
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
           LLGRLA+++AK LL+G+KVV++R E+I ISGNF R+KLK MSFLRKRCN+NPARG FH+R
Sbjct: 16  LLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYR 75

Query: 690 AP 695
           AP
Sbjct: 76  AP 77


>U31528-1|AAA74904.1|  202|Caenorhabditis elegans 60S ribosomal
           protein L13A protein.
          Length = 202

 Score =  101 bits (242), Expect = 5e-22
 Identities = 45/62 (72%), Positives = 56/62 (90%)
 Frame = +3

Query: 510 LLGRLAAVIAKVLLEGNKVVLVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 689
           LLGRLA+++AK LL+G+KVV++R E+I ISGNF R+KLK MSFLRKRCN+NPARG FH+R
Sbjct: 16  LLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYR 75

Query: 690 AP 695
           AP
Sbjct: 76  AP 77


>CU457741-15|CAM36357.1|  110|Caenorhabditis elegans Hypothetical
           protein C42C1.14 protein.
          Length = 110

 Score = 81.0 bits (191), Expect = 7e-16
 Identities = 36/59 (61%), Positives = 45/59 (76%)
 Frame = -2

Query: 441 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKFRGIQPARP 265
           M  R+T+RRRLSYNT SN++R+V+TPGGRLV QY+KK  +IP+C     K  GI PARP
Sbjct: 1   MSLRVTYRRRLSYNTTSNKKRLVKTPGGRLVVQYIKKRGQIPKCRDTGVKLHGITPARP 59



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -1

Query: 238 KKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV 140
           ++TV R YGG L    VK+RI RAFL+EEQKIV
Sbjct: 69  ERTVTRAYGGCLSPNAVKERITRAFLVEEQKIV 101


>AF016425-4|AAB65339.1|  518|Caenorhabditis elegans Hypothetical
           protein F59A7.8 protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 505 GLCWAVWRQSSPRS 546
           GLCW +WR+S P S
Sbjct: 151 GLCWLLWRESQPHS 164


>Z48334-6|CAA88313.1|  655|Caenorhabditis elegans Hypothetical
           protein F10B5.6 protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 190 HIYGRGHHHKHVSLFSYGSKDGTFSRSSWLDTTEFALALTTP 315
           HI  RG++H+   +F+Y +    F R  + D  E ++    P
Sbjct: 115 HIIARGNYHQIHIVFAYYAATALFQRKLYEDVAELSVGHLLP 156


>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 595 MLICSQRTKTTLFPSRRTLAMTAARRP 515
           +LIC +R K  L   RR  AMT  R P
Sbjct: 373 LLICRERLKVQLEEVRRLQAMTVVRHP 399


>AF314467-1|AAG41979.1|  655|Caenorhabditis elegans APC6 protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 190 HIYGRGHHHKHVSLFSYGSKDGTFSRSSWLDTTEFALALTTP 315
           HI  RG++H+   +F+Y +    F R  + D  E ++    P
Sbjct: 115 HIIARGNYHQIHIVFAYYAATALFQRKLYEDVAELSVGHLLP 156


>AC024876-7|AAF60890.4|  211|Caenorhabditis elegans Hypothetical
           protein Y94H6A.7 protein.
          Length = 211

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -1

Query: 484 PYC*SPSFSLKKLENGAAAYIQATTVVQHKIKSKKNSKDTGWPLGLSVCKKA 329
           PY  S S    ++     A + AT+ V + I  +      GWPLG +VC +A
Sbjct: 75  PYYESGSKQFDEVLQHIMATVAATSYVMYVILRRDLQTKLGWPLG-AVCTQA 125


>U53335-6|AAA96171.2|  518|Caenorhabditis elegans Hypothetical
           protein C55C3.5 protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -1

Query: 580 QRTKTTLFPSRRTLAMTAARRPSRDHG 500
           Q+ KTT+F S   L +TAA RPS D+G
Sbjct: 366 QQQKTTVFVSL-VLTITAALRPSFDNG 391


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,898,506
Number of Sequences: 27780
Number of extensions: 323795
Number of successful extensions: 936
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)