BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30358 (756 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_1127 - 31098233-31098326,31099968-31100047,31100198-311003... 64 2e-10 04_04_1355 + 32851514-32851696,32852132-32852224,32852334-328524... 59 4e-09 03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 36 0.026 03_06_0191 - 32228642-32228949,32229028-32230567 30 1.7 01_03_0196 - 13696056-13697448,13697676-13697713 30 1.7 03_03_0101 - 14431327-14432390,14432599-14432731 29 5.3 11_06_0608 - 25442883-25443206,25443420-25443623,25443831-254438... 28 7.0 11_04_0236 + 15215386-15216197,15216854-15218888,15219131-152200... 28 9.2 04_04_0574 + 26338567-26338819,26338918-26338989,26339077-263391... 28 9.2 01_06_0207 + 27534226-27534723 28 9.2 >04_04_1127 - 31098233-31098326,31099968-31100047,31100198-31100353, 31100481-31100616,31101195-31101346,31102307-31102390, 31102495-31102656 Length = 287 Score = 63.7 bits (148), Expect = 2e-10 Identities = 28/67 (41%), Positives = 43/67 (64%) Frame = +2 Query: 308 SNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQD 487 SN + ++A I+ HE +Y ALK H+ +L+L A +Q + M+R D A KQLK++Q Sbjct: 100 SNPVLRLIAGIIFMHEQDYTEALKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQ 159 Query: 488 IEDDGTL 508 I++D TL Sbjct: 160 IDEDHTL 166 Score = 55.2 bits (127), Expect = 5e-08 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Frame = +3 Query: 18 DELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQEL-KT 194 D LF+++N FY+G YQ AIN + V A +RDA ++RSY+A G+Y++V E+ + Sbjct: 5 DLLFNLRNLFYLGAYQAAINNSD-VPGLDADAAAERDAIVFRSYVALGSYQLVISEIDSS 63 Query: 195 ADPMLQPLKSLVDY 236 A LQ +K L Y Sbjct: 64 AATSLQAVKLLALY 77 >04_04_1355 + 32851514-32851696,32852132-32852224,32852334-32852485, 32852702-32852837,32852947-32853102,32853233-32853312, 32853475-32853568 Length = 297 Score = 58.8 bits (136), Expect = 4e-09 Identities = 28/67 (41%), Positives = 43/67 (64%) Frame = +2 Query: 308 SNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQD 487 SN I +VA T+ HE +Y ALK ++ ++EL A +Q L M+R D A KQL+++Q Sbjct: 110 SNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQ 169 Query: 488 IEDDGTL 508 +++D TL Sbjct: 170 LDEDHTL 176 Score = 52.8 bits (121), Expect = 3e-07 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%) Frame = +3 Query: 18 DELFDVKNAFYVGNYQQAINEAQSV---SPSTPLVALQRDAFLYRSYIAQGNYRIVQQEL 188 D LF ++N+FYVG YQ I Q++ + +P +RD+ LYRSYIA G++++V E+ Sbjct: 8 DHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDEI 67 Query: 189 -KTADPMLQPLKSLVDY 236 A LQ ++ L Y Sbjct: 68 GPGAATPLQAVRLLTVY 84 Score = 36.3 bits (80), Expect = 0.026 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSE 594 QLA AW++L+ GG IQ+AH +LSE Sbjct: 178 QLANAWVDLVMGGSKIQEAHLIFQDLSE 205 >03_06_0222 + 32466379-32466741,32466849-32466948,32467443-32467547, 32467627-32467789,32467995-32468115,32468625-32468705, 32468813-32468911,32468955-32468986,32468987-32469137, 32469477-32469563,32470290-32470409,32470514-32470645, 32470743-32470840,32470919-32471042,32471126-32471233, 32471822-32471957,32472751-32472861,32472963-32473026, 32473133-32473205,32473762-32473938,32474012-32474122, 32474189-32474449,32474811-32474981,32475073-32475228, 32475590-32475823,32475936-32476103,32476316-32476425, 32476513-32477041 Length = 1394 Score = 36.3 bits (80), Expect = 0.026 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 1/105 (0%) Frame = +2 Query: 332 AATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLR 511 A+++YY N E +L H+A LE A C +++P + RK L + + Sbjct: 464 ASSVYYRVSNEEPSL---HSAVLLEQAA----CCYVLSKPPMLRKYGFHLVLAGNSYYIS 516 Query: 512 S*HKHG*I*FRAAL-VSKTHTTA*WSYLNASVHWDLVRPLSVLGL 643 +H +R AL V K H WSY+N VH+++ R VLG+ Sbjct: 517 DQKQHAVRAYRNALFVYKQHP---WSYINDHVHFNVGRWYGVLGI 558 >03_06_0191 - 32228642-32228949,32229028-32230567 Length = 615 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Frame = +2 Query: 287 VAKGTELSNEIFLIVAATIYYHEDNYEAALKILH----NAESLELRAFTLQCLLAMNRPD 454 V + TE+++ + + + + N++ AL +L N ES+ L+CL+ + D Sbjct: 492 VVQDTEVASSVLTVFILALC-KQGNFKGALSVLSCIPSNVESVNSHVILLKCLIDVGEVD 550 Query: 455 LARKQLKLLQ 484 LA + +K ++ Sbjct: 551 LAIEHIKSIR 560 >01_03_0196 - 13696056-13697448,13697676-13697713 Length = 476 Score = 30.3 bits (65), Expect = 1.7 Identities = 11/43 (25%), Positives = 25/43 (58%) Frame = +2 Query: 347 YHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLK 475 YH + ++++K LH+ + L + A + C+++ P L ++ K Sbjct: 16 YHHPSIDSSVKPLHDYQQLLISAIGVNCIISQAAPKLTKRSDK 58 >03_03_0101 - 14431327-14432390,14432599-14432731 Length = 398 Score = 28.7 bits (61), Expect = 5.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 315 SLDSSVPLATRASISATMADYWHQVVSNLP 226 SL SVP T A+ +AT W Q+ + LP Sbjct: 101 SLSRSVPSLTMAAATATALARWSQIAAQLP 130 >11_06_0608 - 25442883-25443206,25443420-25443623,25443831-25443859, 25444335-25444557 Length = 259 Score = 28.3 bits (60), Expect = 7.0 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -3 Query: 136 RNASRWSATRGVEGLTLCASLIA 68 R RW A GV GL LCA+ ++ Sbjct: 39 REQWRWEAVEGVRGLWLCAAFLS 61 >11_04_0236 + 15215386-15216197,15216854-15218888,15219131-15220017, 15222420-15226194 Length = 2502 Score = 27.9 bits (59), Expect = 9.2 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +1 Query: 664 EEAEQQLTDAASRAPQHADL-LLGLAAHRGAS 756 EEAE+ LTDAA+ P H L L+ HR S Sbjct: 912 EEAEEALTDAANVHPNHPTLKLMRYNEHRMVS 943 >04_04_0574 + 26338567-26338819,26338918-26338989,26339077-26339135, 26339229-26339288,26339304-26339364,26339496-26339592, 26339684-26339750,26340123-26340311,26340404-26340639, 26340747-26340848,26340981-26341092 Length = 435 Score = 27.9 bits (59), Expect = 9.2 Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -1 Query: 318 ISLDS-SVPLATRASISATMADYWHQVVSNLP 226 +++DS LA + ++ M YWHQ+ ++P Sbjct: 231 LAIDSPKATLAVKRRLACEMVKYWHQIQESIP 262 >01_06_0207 + 27534226-27534723 Length = 165 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +3 Query: 498 TALCAASTSMAESNSGRPWYPRRTLQRDG 584 TA AAST+ A RP PRR L DG Sbjct: 32 TAAAAASTARASWRRRRPQRPRRLLLGDG 60 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,932,990 Number of Sequences: 37544 Number of extensions: 376684 Number of successful extensions: 922 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 920 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2016060588 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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