BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30358 (756 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 90 7e-18 BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 90 7e-18 BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 90 7e-18 BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 90 7e-18 AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 90 7e-18 AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 90 7e-18 AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 90 7e-18 AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 90 7e-18 AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 89 1e-17 AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 88 4e-17 >CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. Length = 308 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 242 ALDKDSGYPETLVNL 256 >BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex, subunit epsilon protein. Length = 308 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 242 ALDKDSGYPETLVNL 256 >BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex, subunit epsilon protein. Length = 308 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 242 ALDKDSGYPETLVNL 256 >BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex, subunit epsilon protein. Length = 308 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 242 ALDKDSGYPETLVNL 256 >AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coatomer protein complex isoform a variant protein. Length = 308 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 34.7 bits (76), Expect = 0.36 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 242 ALDKDSCYPETLVNL 256 >AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein protein. Length = 308 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 242 ALDKDSGYPETLVNL 256 >AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. Length = 307 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 82 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 141 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 142 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 180 Score = 86.2 bits (204), Expect = 1e-16 Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEA V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 14 EVDELFDVKNAFYIGSYQQCINEAHGVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 73 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 74 PSSAPELQAVRMFADY 89 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 182 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHIAQGRWEAAEGLLQE 240 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 241 ALDKDSGYPETLVNL 255 >AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. Length = 245 Score = 90.2 bits (214), Expect = 7e-18 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 20 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 79 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 80 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 118 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 120 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 178 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 179 ALDKDSGYPETLVNL 193 >AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. Length = 308 Score = 89.4 bits (212), Expect = 1e-17 Identities = 42/99 (42%), Positives = 68/99 (68%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 508 +SLE A T+Q LL ++R DLARK+LK +QD+++D TL Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 35.1 bits (77), Expect = 0.28 Identities = 21/75 (28%), Positives = 33/75 (44%) Frame = +1 Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690 QLA AW++L GG +QDA+Y E+++ WE AE L + Sbjct: 183 QLATAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQE 241 Query: 691 AASRAPQHADLLLGL 735 A + + + L+ L Sbjct: 242 ALDKDSGYPETLVNL 256 >AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. Length = 147 Score = 87.8 bits (208), Expect = 4e-17 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Frame = +3 Query: 12 DVDELFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK 191 +VDELFDVKNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74 Query: 192 -TADPMLQPLKSLVDY 236 ++ P LQ ++ DY Sbjct: 75 PSSAPELQAVRMFADY 90 Score = 53.6 bits (123), Expect = 7e-07 Identities = 24/65 (36%), Positives = 42/65 (64%) Frame = +2 Query: 212 AIEEFGRLLTT*CQ*SAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 391 A+ F L + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142 Query: 392 AESLE 406 +SLE Sbjct: 143 GDSLE 147 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 103,079,026 Number of Sequences: 237096 Number of extensions: 2129229 Number of successful extensions: 5105 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5105 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 9127122082 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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