Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30358
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD2988...    65   1e-10
AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA...    65   1e-10

>AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD29885
           protein.
          Length = 306

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +2

Query: 296 GTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLK 475
           G E    I+ +  A +Y H+  +E ALKILH + +LE  A ++QCLL + R DLA++ + 
Sbjct: 102 GEEDETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVA 161

Query: 476 LLQDIEDDGTL 508
            +Q+I DD TL
Sbjct: 162 KMQEISDDATL 172



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   HQQDVDE-LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQ 179
           +++D +  LFD +N +Y+GN+  +IN    V P       +  +++Y SY+A  + RIV 
Sbjct: 6   NEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDSGRIVA 62

Query: 180 QELKTADPMLQPLKSL 227
            ++K  +    PL++L
Sbjct: 63  SDIKEGNS--TPLQAL 76



 Score = 31.9 bits (69), Expect = 0.97
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = +1

Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
           QLAQAW+ L QG   +QDA +   E  E                      +EEA+  L +
Sbjct: 174 QLAQAWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGLERYEEADSVLRE 232

Query: 691 AASRAPQHADLLLGLAAH 744
           +  +     D L+ L  H
Sbjct: 233 SLLKKHNDYDTLINLMVH 250


>AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA
           protein.
          Length = 306

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +2

Query: 296 GTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLK 475
           G E    I+ +  A +Y H+  +E ALKILH + +LE  A ++QCLL + R DLA++ + 
Sbjct: 102 GEEDETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVA 161

Query: 476 LLQDIEDDGTL 508
            +Q+I DD TL
Sbjct: 162 KMQEISDDATL 172



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   HQQDVDE-LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQ 179
           +++D +  LFD +N +Y+GN+  +IN    V P       +  +++Y SY+A  + RIV 
Sbjct: 6   NEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDSGRIVA 62

Query: 180 QELKTADPMLQPLKSL 227
            ++K  +    PL++L
Sbjct: 63  SDIKEGNS--TPLQAL 76



 Score = 31.9 bits (69), Expect = 0.97
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = +1

Query: 511 QLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXXMWEEAEQQLTD 690
           QLAQAW+ L QG   +QDA +   E  E                      +EEA+  L +
Sbjct: 174 QLAQAWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGLERYEEADSVLRE 232

Query: 691 AASRAPQHADLLLGLAAH 744
           +  +     D L+ L  H
Sbjct: 233 SLLKKHNDYDTLINLMVH 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,831,653
Number of Sequences: 53049
Number of extensions: 652208
Number of successful extensions: 1815
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)