Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30356
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030132-1|AAH30132.2|  812|Homo sapiens ICAM5 protein protein.        29   9.5  
BC026338-1|AAH26338.1|  924|Homo sapiens intercellular adhesion ...    29   9.5  

>BC030132-1|AAH30132.2|  812|Homo sapiens ICAM5 protein protein.
          Length = 812

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/68 (23%), Positives = 28/68 (41%)
 Frame = -2

Query: 493 TCDSARFTIVTVSLKHPPGATKAP*NANRSVMSLQPSYGHYQSD*CCGLTGCTTLHKRNR 314
           TC +  +    +S + PPGA     ++N S +S+  + G +  +  C  T     H R  
Sbjct: 656 TCRAEAWPPAQISWRAPPGALNIGLSSNNSTLSVAGAMGSHGGEYECAATNAHGRHARRI 715

Query: 313 KREMTSFW 290
              +   W
Sbjct: 716 TVRVAGPW 723


>BC026338-1|AAH26338.1|  924|Homo sapiens intercellular adhesion
           molecule 5, telencephalin protein.
          Length = 924

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/68 (23%), Positives = 28/68 (41%)
 Frame = -2

Query: 493 TCDSARFTIVTVSLKHPPGATKAP*NANRSVMSLQPSYGHYQSD*CCGLTGCTTLHKRNR 314
           TC +  +    +S + PPGA     ++N S +S+  + G +  +  C  T     H R  
Sbjct: 768 TCRAEAWPPAQISWRAPPGALNIGLSSNNSTLSVAGAMGSHGGEYECAATNAHGRHARRI 827

Query: 313 KREMTSFW 290
              +   W
Sbjct: 828 TVRVAGPW 835


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,534,005
Number of Sequences: 237096
Number of extensions: 1193864
Number of successful extensions: 1709
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)