BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30356 (602 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g65440.1 68418.m08230 expressed protein 29 3.1 At2g25150.1 68415.m03008 transferase family protein similar to 1... 27 7.2 >At5g65440.1 68418.m08230 expressed protein Length = 1050 Score = 28.7 bits (61), Expect = 3.1 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +3 Query: 438 PGGCLSDTVTIVKRALSQVLLHHSV-LKAI*GSGWKVS 548 P GC T+T+ K L +V+ HH V L + SGWK + Sbjct: 231 PPGCNIATLTVSKEKL-EVVRHHIVELNSTLSSGWKAA 267 >At2g25150.1 68415.m03008 transferase family protein similar to 10-deacetylbaccatin III-10-O-acetyl transferase [gi:6746554], 2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase [gi:11559716] from Taxus cuspidata; contains Pfam transferase family domain PF00248; contains EST gb:R65039 Length = 461 Score = 27.5 bits (58), Expect = 7.2 Identities = 11/26 (42%), Positives = 20/26 (76%) Frame = +3 Query: 429 FVAPGGCLSDTVTIVKRALSQVLLHH 506 F A G L D V+++++ALS++L+H+ Sbjct: 53 FKANGKNLDDPVSLLRKALSELLVHY 78 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,347,924 Number of Sequences: 28952 Number of extensions: 176105 Number of successful extensions: 336 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 333 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 336 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1197101088 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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