Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30353
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.4  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 110 YNIINYSFVSIVSFGLW*ECEYLLNKSYLIIN 205
           ++++++  VS +  G   E + LL +SYLII+
Sbjct: 120 FDMLSHVDVSFIKAGFRLEYKQLLKRSYLIIS 151


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 110 YNIINYSFVSIVSFGLW*ECEYLLNKSYLIIN 205
           ++++++  VS +  G   E + LL +SYLII+
Sbjct: 120 FDMLSHVDVSFIKAGFRLEYKQLLKRSYLIIS 151


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 557 IYRCSCRSYERFLFQYL*SIWSRMRKCGKKFEL 655
           I++   R YE F   +L + WS  R+   +F++
Sbjct: 198 IFQKKWRGYEDFRRDFLRTYWSAKRQRDIRFQI 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,278
Number of Sequences: 336
Number of extensions: 3223
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)