Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30352
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 157 1e-37
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 131 1e-29
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 102 5e-21
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 7e-17
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 81 2e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 79 8e-14
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 74 3e-12
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 72 9e-12
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 68 2e-10
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 62 9e-09
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 54 2e-06
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 52 1e-05
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 51 2e-05
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 49 7e-05
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 49 9e-05
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 40 0.043
UniRef50_Q9U599 Cluster: Gom; n=1; Drosophila melanogaster|Rep: ... 37 0.30
UniRef50_Q07U65 Cluster: SNF2-related protein; n=2; Proteobacter... 34 2.1
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 34 2.1
UniRef50_Q0UT02 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_UPI00006CB343 Cluster: hypothetical protein TTHERM_0045... 33 6.5
UniRef50_Q3JER9 Cluster: TonB-like precursor; n=1; Nitrosococcus... 33 6.5
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 32 8.6
UniRef50_UPI0000DA42CF Cluster: PREDICTED: hypothetical protein;... 32 8.6
UniRef50_UPI000051A148 Cluster: PREDICTED: similar to radial spo... 32 8.6
UniRef50_A3PRZ3 Cluster: Putative uncharacterized protein precur... 32 8.6
UniRef50_Q5B9F8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 157 bits (382), Expect = 1e-37
Identities = 73/87 (83%), Positives = 81/87 (93%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WTQSAF RLD +FGSWKTPSK+KKNFNLPQPK ANT+L+RLLKS+EIR+VLRAP KRV+R
Sbjct: 117 WTQSAFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVR 176
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLRGK 263
ATRKLNPLTN KAMLKLNPYAAVL+ K
Sbjct: 177 ATRKLNPLTNTKAMLKLNPYAAVLKKK 203
Score = 49.6 bits (113), Expect = 5e-05
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 254 ERKAILELRRRKNLKALADAEKSGLKLYKRNPAMKAEKLRERRRKNI 394
++KA+L+ +RKN +AL AEK G+KL +PA+KA KL+E+R K+I
Sbjct: 201 KKKAVLDQVKRKNKRALEVAEKRGIKLPDDDPAVKALKLKEKRAKSI 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 131 bits (316), Expect = 1e-29
Identities = 62/97 (63%), Positives = 77/97 (79%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF RL+ LFG+WK PS KK +NLPQPK ANT+L+RLLKS+EIRKVLR P KRV R
Sbjct: 255 WTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFR 314
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLRGKLS*SCAEGRT 293
+ R+LNPLTN + ++KLNPYA VL+ + + AE RT
Sbjct: 315 SVRRLNPLTNVRQLIKLNPYAEVLKRRAA-LAAEKRT 350
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 102 bits (245), Expect = 5e-21
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 89.0 bits (211), Expect = 7e-17
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +3
Query: 15 AFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIRATRK 194
AF +LD L+G+W + K N+NLP K NT+L+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 195 LNPLTNNKAMLKLNPYAAVLR 257
NPL N MLKLNPYA +R
Sbjct: 155 KNPLKNLGIMLKLNPYAKTMR 175
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 80.6 bits (190), Expect = 2e-14
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD +FG+ + S KK + P A T+LTRL+ SDEI+ L AP IR
Sbjct: 255 WTKSAFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIR 314
Query: 183 --ATRKLNPLTNNKAMLKLNPYAAVLR 257
A K NPL N AM KLNPYA V R
Sbjct: 315 AHAPLKRNPLKNKSAMDKLNPYAKVAR 341
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 79.0 bits (186), Expect = 8e-14
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +3
Query: 15 AFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRV-IRATR 191
AF +LD L+G+W + K N+NLP K NT+L+R+LK I++ LRAP KR+ R +
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLK 232
Query: 192 KLNPLTNNKAMLKLNP 239
K NPL N + MLKLNP
Sbjct: 233 KKNPLKNLRLMLKLNP 248
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIR-KVLRAPNKRVI 179
WTQSAF LD LFG+++ S K + L +P N +L R++ S++++ KV A +V+
Sbjct: 254 WTQSAFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVL 313
Query: 180 RATRKLNPLTNNKAMLKLNPYA 245
+K NPL N KAM +LNPYA
Sbjct: 314 HDVQKKNPLKNTKAMDRLNPYA 335
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 72.1 bits (169), Expect = 9e-12
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIR-KVLRAPNKRVI 179
WTQSAF LD LFG+++ S K + L +P N +L R++ S++++ KV A V+
Sbjct: 100 WTQSAFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVL 159
Query: 180 RATRKLNPLTNNKAMLKLNPYA 245
+K NPL N+KA+ +LNPYA
Sbjct: 160 HEVQKKNPLKNSKALDRLNPYA 181
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLR-----APN 167
WT SAFG LD ++GS PS KK+F LP +L++++ S +I+KVLR A +
Sbjct: 234 WTSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVS 293
Query: 168 KRVIRATRKLNPLTNNKAMLKLNPYAA 248
KR + +K NPL N + L+LNPYAA
Sbjct: 294 KRGV--VQKKNPLKNFQVQLRLNPYAA 318
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVI- 179
W+ SAF LD ++G+ PS KK+F LP + ++ RL+ S E++ V+RA +
Sbjct: 257 WSSSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGSALT 316
Query: 180 -RA-TRKLNPLTNNKAMLKLNPYAA 248
RA +K NPL N + +L+LNPYAA
Sbjct: 317 KRAGVQKKNPLLNKQVLLRLNPYAA 341
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 62.1 bits (144), Expect = 9e-09
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVI- 179
WT+SAF +L+ +FG+ K ++ K F + + A ++ R++ + E K+LRA K V+
Sbjct: 254 WTESAFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLP 311
Query: 180 RATRKLNPLTNNKAMLKLNPYAAVLRGKLS 269
+ ++ NPL N AM+KLNPYA + KL+
Sbjct: 312 KVPKRANPLKNWAAMVKLNPYAKIASHKLA 341
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
W++ AF +LD ++G KKN+ LP+P N ++ R++ SD+++ L +
Sbjct: 252 WSEDAFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKK 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
T+ N LTN +LNP +LR
Sbjct: 312 RTQNKNSLTNFAVRCRLNPAYKLLR 336
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 96 KXANTNLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVL 254
K N++L+R+LK EI++ L+AP K + K NPLTN + MLKLNP A +
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTM 55
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/84 (29%), Positives = 49/84 (58%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF LD ++ + K+N+ LP+ T++ R+L+SD ++K P + +
Sbjct: 239 WTKSAFASLDDVYAA-------KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLV 290
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVL 254
RK++P ++ +A+ +L+P V+
Sbjct: 291 IERKVDPFSSKEALARLDPSGTVM 314
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRA---PNKR 173
WT+ A+ +LD L+G+ + K + P P NT+L+R++ S ++ VL+A +K+
Sbjct: 252 WTEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKK 311
Query: 174 VIRATRKL---NPLTNNKAMLK 230
+I R L + L+ N A +K
Sbjct: 312 IINVRRNLLIASKLSQNNARIK 333
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPN----- 167
+T+ A RL ++GS+ S K + LP+P N ++TR++ S E++ VLR
Sbjct: 255 FTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCM 314
Query: 168 KRVIRATRKLNPLTNNKAMLKLNPYAAVLR 257
+ R+ K N LTN LNP LR
Sbjct: 315 GSMGRSKTKKNNLTNLTKRACLNPAYTSLR 344
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 39.9 bits (89), Expect = 0.043
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAP 164
WT+SAF +LD +FG + ++ F LP + +L L SD ++ +L P
Sbjct: 248 WTESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQAILDEP 301
>UniRef50_Q9U599 Cluster: Gom; n=1; Drosophila melanogaster|Rep: Gom
- Drosophila melanogaster (Fruit fly)
Length = 305
Score = 37.1 bits (82), Expect = 0.30
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 221 DAETQSLRGRAERKAILELRRRKNLKALADAEKSGLKLYKRNPAMKAEKLRERRRK 388
DAE L+ A + EL + LK L + EK K+ K +KAE+ +ER +K
Sbjct: 202 DAELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257
>UniRef50_Q07U65 Cluster: SNF2-related protein; n=2;
Proteobacteria|Rep: SNF2-related protein -
Rhodopseudomonas palustris (strain BisA53)
Length = 963
Score = 34.3 bits (75), Expect = 2.1
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +2
Query: 221 DAETQSLRGRAERKAILELRRRKNLKALADAEKSGLKLYKRNPAMKAEKLRERRR 385
D ET L AE RR K LKA ADA K L+ + P AEK+ E RR
Sbjct: 856 DEETVKLEAYAEDLESANNRRAKELKAEADAAKRALRGSQSIPL--AEKIEEERR 908
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 34.3 bits (75), Expect = 2.1
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVL 155
WT+SAF LD ++ S KK F+LP+ N ++ ++ SD ++ VL
Sbjct: 249 WTESAFKALDGIYES-------KKRFSLPRSIMTNADIEAVITSDAVQSVL 292
>UniRef50_Q0UT02 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 975
Score = 33.9 bits (74), Expect = 2.8
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 ERKAILELRRRKNLKA-LADAEKSGLKLYKRNP 349
ERKA E R R ++ LADAEK L+LYKR+P
Sbjct: 172 ERKAAEERRYRVEMEEKLADAEKRRLELYKRSP 204
>UniRef50_UPI00006CB343 Cluster: hypothetical protein TTHERM_00459300;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00459300 - Tetrahymena thermophila SB210
Length = 2984
Score = 32.7 bits (71), Expect = 6.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +3
Query: 9 QSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLL-----KSDEIRKVLRAPNKR 173
Q++ R+ P F S S KKN PQ +NL ++L KS + K + NK
Sbjct: 1554 QTSQQRISPTFTSLSVTSNSKKNIKSPQKASLFSNLDKILRAGRSKSSSLEKQIYDKNK- 1612
Query: 174 VIRATRKLNPLTNNKAMLK 230
+I + + +N+K +K
Sbjct: 1613 LISKPKDVQKRSNSKEKVK 1631
>UniRef50_Q3JER9 Cluster: TonB-like precursor; n=1; Nitrosococcus
oceani ATCC 19707|Rep: TonB-like precursor -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 318
Score = 32.7 bits (71), Expect = 6.5
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 221 DAETQSLRGRAERKAILELRRRKNLKALADAEKSGLKLYKRNPAMKAEKLRERRRK 388
+AE Q+ A R+A E +R + K A+AEK L+ +R K E R+K
Sbjct: 127 EAERQAKEEAARRQAEAEKKRAEEKKRQAEAEKRRLEEERRRAEAAKRKAEEERKK 182
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 32.3 bits (70), Expect = 8.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 1 SGLSPHSAGLTPYSGHGRHHQNKRRTSTCPNRR 99
SG H +GL+ S +G+H R++S+C +R
Sbjct: 567 SGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_UPI0000DA42CF Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 129
Score = 32.3 bits (70), Expect = 8.6
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 215 QGDAETQSLRGRAERKAILELRRRKNLKALADAEKSGLKLYKRNPAMKAEKLRERRRKNI 394
+G+ E + RG E++ + +R+K K +K K +R + K R RRRK +
Sbjct: 69 RGEEEEKRRRGEEEKRKKRKRKRKKKRKKKRKKKKKKKKRRRRKRRRRRRKRRRRRRKQL 128
>UniRef50_UPI000051A148 Cluster: PREDICTED: similar to radial
spokehead-like 2; n=1; Apis mellifera|Rep: PREDICTED:
similar to radial spokehead-like 2 - Apis mellifera
Length = 580
Score = 32.3 bits (70), Expect = 8.6
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +2
Query: 158 CSQQTRDPCYTQIEPTH**QGDAETQS----LRGRAERKAILELRRRKNLKALADAEKSG 325
C Q+T + TQIEP D E Q L G+ +A++E+ + + AL + ++
Sbjct: 358 CPQKTGEDVSTQIEPGDLFDFDFEVQPILEVLVGKTIEQALMEVLEEEEIAALKEQQRKF 417
Query: 326 LKLYKRNPAMKAEKLRERRRK 388
L+L A + +L E+ R+
Sbjct: 418 LELRAMEKA-ETRRLEEQERR 437
>UniRef50_A3PRZ3 Cluster: Putative uncharacterized protein
precursor; n=2; Rhodobacter sphaeroides|Rep: Putative
uncharacterized protein precursor - Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9)
Length = 669
Score = 32.3 bits (70), Expect = 8.6
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 215 QGDAETQSLRGRAERKAILELRRRKNLKALADAEKSGLKLYKRNPAMKAEKLRERR 382
+ +A+TQ+L + A LE RR+ KAL+DAE +GL + +AE + R
Sbjct: 500 RAEAQTQALSEADAQLAALEAARREKAKALSDAE-AGLTALEAEQRTQAEAQTKAR 554
>UniRef50_Q5B9F8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 463
Score = 32.3 bits (70), Expect = 8.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 319 LLGISKSLQVLPSAQL*DSFPLSTAA*GLSFSIALLLVSGFN 194
LLGI L S+ L SFP AA G F +A+ L G +
Sbjct: 222 LLGICAGLSTFTSSNLAGSFPSLAAAWGFGFMVAIYLTGGIS 263
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,751,806
Number of Sequences: 1657284
Number of extensions: 7373783
Number of successful extensions: 22211
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 21559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22185
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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