Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30352
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 102 8e-22
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 102 8e-22
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 102 8e-22
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 99 1e-20
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 31 2.2
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 251 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 310
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 311 RVLKKNPLKNLRIMLKLNPYAKTMR 335
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 266 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 325
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 326 RVLKKNPLKNLRIMLKLNPYAKTMR 350
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (245), Expect = 8e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
WT+SAF +LD L+G+W+ + K N+NLP K NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 98.7 bits (235), Expect = 1e-20
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 3 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKXANTNLTRLLKSDEIRKVLRAPNKRVIR 182
W +SAF +LD L+G+W+ + K N+NLP + NT+L+R+LKS EI++ LRAP K++ R
Sbjct: 252 WIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 183 ATRKLNPLTNNKAMLKLNPYAAVLR 257
K NPL N + MLKLNPYA +R
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMR 336
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 7 LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRXPTLTSHVFSSLMRSG 147
+ PH A L G G Q K ++T P++R P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,704,257
Number of Sequences: 237096
Number of extensions: 1137246
Number of successful extensions: 6335
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6335
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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