Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30352
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    26   0.24 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 84  LPQPKXANTNLTRLLKSDEIRKVLRAPNKRV 176
           LP P   N  L  L+ S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 16  HSAGLTPYSGHGRHHQNKRRTSTCPNRRXPTLTSHVFSSLMRS 144
           H+ G T    H  HH   +       R+ PTL S  +SS + S
Sbjct: 341 HTMGPTMGPPHHHHHHQTQSLQHLHYRQPPTL-SESYSSYVNS 382


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 3   WTQSAFGRLDPLFGSWKTPSKQKKNFNLP 89
           WT ++     P  G +KT SK    F+LP
Sbjct: 32  WTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 37  YSGHGRHHQNKRRTSTC 87
           YS +  HH    R S+C
Sbjct: 435 YSAYSLHHVRSSRESSC 451


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 242 RGRAERKAILELRRRKNLKALADAEKSGLKLYKR 343
           +GR ++    + RR+ + K +A A K   KL+ R
Sbjct: 429 KGRDKKSTSKKPRRKFHFKQIARAVKFTSKLFGR 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,731
Number of Sequences: 438
Number of extensions: 1890
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)