Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30349
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 31 1.1
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 30 1.5
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 30 1.5
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 30 1.5
Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 30 1.9
U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical p... 30 1.9
U49829-5|AAK68351.1| 564|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z77658-3|CAB01159.1| 112|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF043703-2|AAK21501.2| 68|Caenorhabditis elegans Hypothetical ... 29 4.5
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 28 5.9
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 28 5.9
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 28 5.9
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 28 5.9
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 28 5.9
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 5.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 5.9
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 455 SDIHYYCILHVLHNCVSIL-LLFSILLACGAWKANSCLVSTFFVYSFFH 598
S I ++ + N VS++ L+ + C WK +STFF+ F H
Sbjct: 39 SGISFFSSSILAQNVVSLINLVIQLFCVCFIWKNGYLKLSTFFIILFIH 87
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -3
Query: 599 DGRNYT----RRMYSLNRNWPSKHHRRV 528
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 460 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 487
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -3
Query: 599 DGRNYT----RRMYSLNRNWPSKHHRRV 528
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 325 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 352
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -3
Query: 599 DGRNYT----RRMYSLNRNWPSKHHRRV 528
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 325 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 352
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -3
Query: 599 DGRNYT----RRMYSLNRNWPSKHHRRV 528
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 460 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 487
>Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical
protein T23D5.12 protein.
Length = 350
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = +2
Query: 509 LLLFSILLACGAWKANSCLVSTFFVYSFFHLFLTIGLIVWEALTAGWIQXXXXXXXXXXX 688
++ ++ CG + + C +S F+Y ++ LF LI +E GW+
Sbjct: 90 IMKIGLVFFCGIYGSTICFISVQFLYRYWALFDAPKLIWFE----GWMMSAWLIYSFGIG 145
Query: 689 XXXXFGVKYLME 724
G+ Y +E
Sbjct: 146 ATWSIGIHYFLE 157
>Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical
protein T23D5.10 protein.
Length = 364
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = +2
Query: 509 LLLFSILLACGAWKANSCLVSTFFVYSFFHLFLTIGLIVWEALTAGWIQXXXXXXXXXXX 688
++ ++ CG + + C +S F+Y ++ LF LI +E GW+
Sbjct: 104 IMKIGLVFFCGIYGSTICFISVQFLYRYWALFDAPKLIWFE----GWMMSAWLIYSFGIG 159
Query: 689 XXXXFGVKYLME 724
G+ Y +E
Sbjct: 160 ATWSIGIHYFLE 171
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
C29A12.4 protein.
Length = 1560
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 14 RHCALAHSIYSIFEFKFNKITVYNSAKIIPVKTFFTADFGYCVQKYICLFCN 169
R C++ +++ +F+F+ + VYNS I A+ G C+Q + + C+
Sbjct: 1051 RGCSVL-TLFELFQFECKLLNVYNSGPIARCIEDACANHGRCIQLWSSIRCD 1101
>U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical
protein F20D6.10 protein.
Length = 486
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 506 ILLLFSIL-LACGAWKANSCLVSTFFVYSFFHLFLTIGLIVWEALT 640
+L+LFS+L L CG SCL+ V L ++G V A +
Sbjct: 106 VLILFSVLCLFCGVASDTSCLILPHIVVQAVFLLFSVGYFVLYAFS 151
>U49829-5|AAK68351.1| 564|Caenorhabditis elegans Hypothetical
protein F27D9.7 protein.
Length = 564
Score = 29.9 bits (64), Expect = 1.9
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 557 NWPSKHHRRVKY*IKAK*RHNYVGHVIYNNSVC 459
+W + +++ + RHNY G + Y+N +C
Sbjct: 8 SWKKEQQNLIEHDVTVLLRHNYEGGIAYSNGIC 40
>Z77658-3|CAB01159.1| 112|Caenorhabditis elegans Hypothetical
protein F14D7.3 protein.
Length = 112
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 455 SDIHY---YCILHVLHNCVSILLLFSILLACGAWKANSCLVSTFFVYSFFHLF 604
S++HY YC + +L +S L++ I ++A +C+ S+ F +L+
Sbjct: 22 SEVHYETSYCYMTLLPGKISCFLIYQISYGHNFYEATACMPSSCNEEEFLNLY 74
>AF043703-2|AAK21501.2| 68|Caenorhabditis elegans Hypothetical
protein W10C8.3 protein.
Length = 68
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 497 CVSILLLFSILLACGAWKANSCLVSTF--FVYSFFHLF 604
CVS+ + L+ C AW N+ +S F F +FF LF
Sbjct: 27 CVSLRATIATLIVCYAWWLNNICLSIFSNFRENFFLLF 64
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +2
Query: 461 IHYYCILHVLHNCVSILLLFSILLACGAWKANSCLVST------FFVYSFFHLFLTIGLI 622
I+YY ++ L +S+L+ F + +CL+ST F ++ F + F+T+ +I
Sbjct: 119 INYYYLMVTLCALISLLVTFCKFVFYSDEVVTNCLLSTALHGIPFKIWQFMNFFITVAVI 178
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 VQKYICLFCNFKILYVVSERLKQNILNHLEF 232
VQ+ I F N LY++SERL +++ + F
Sbjct: 1187 VQRLIAAFNNSNFLYLLSERLYEDVFSRFVF 1217
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 181 KYFKITKKANVFLNTISKICGKKRFHWYYLCT 86
K+FK +K V N K+C +F Y CT
Sbjct: 478 KFFKYQEKYGVVCNCAEKLCNNLKFEPRYGCT 509
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 VQKYICLFCNFKILYVVSERLKQNILNHLEF 232
VQ+ I F N LY++SERL +++ + F
Sbjct: 1151 VQRLIAAFNNSNFLYLLSERLYEDVFSRFVF 1181
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 VQKYICLFCNFKILYVVSERLKQNILNHLEF 232
VQ+ I F N LY++SERL +++ + F
Sbjct: 1154 VQRLIAAFNNSNFLYLLSERLYEDVFSRFVF 1184
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 VQKYICLFCNFKILYVVSERLKQNILNHLEF 232
VQ+ I F N LY++SERL +++ + F
Sbjct: 7199 VQRLIAAFNNSNFLYLLSERLYEDVFSRFVF 7229
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 VQKYICLFCNFKILYVVSERLKQNILNHLEF 232
VQ+ I F N LY++SERL +++ + F
Sbjct: 7839 VQRLIAAFNNSNFLYLLSERLYEDVFSRFVF 7869
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 616 TYCVGGFNSWLDTTRTDFALRCAPHCLLVRRQI 714
T CV G +S ++ T +F ++C P C + Q+
Sbjct: 88 TRCVVGCSSTMNNTSEEFGIKC-PECRKINEQV 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,361,279
Number of Sequences: 27780
Number of extensions: 338641
Number of successful extensions: 991
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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