BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30348 (625 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841 107 5e-24 08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848... 107 5e-24 09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 89 3e-18 09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078... 89 3e-18 10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 30 1.3 05_05_0377 - 24498664-24500215,24500306-24500643 29 4.0 01_01_1171 - 9321652-9321712,9322997-9323199 29 4.0 08_02_1238 + 25486263-25487574,25488210-25489117 28 5.2 03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 28 5.2 11_06_0696 + 26358713-26359779,26359826-26360110,26360177-263603... 27 9.2 10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018 27 9.2 10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676 27 9.2 07_01_0025 - 172742-173260,174559-174621,174701-174763,174852-17... 27 9.2 04_03_0362 + 14934236-14934541,14935549-14935647,14935736-149357... 27 9.2 03_02_0203 + 6370729-6370850,6371213-6371391,6371516-6371625,637... 27 9.2 >09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841 Length = 133 Score = 107 bits (258), Expect = 5e-24 Identities = 52/72 (72%), Positives = 59/72 (81%) Frame = -1 Query: 259 QETRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 80 ++TRH LPN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VT Sbjct: 62 KKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVVT 121 Query: 79 NAAARLRSQENE 44 N ARLRSQE+E Sbjct: 122 NKLARLRSQEDE 133 Score = 84.6 bits (200), Expect = 6e-17 Identities = 40/64 (62%), Positives = 50/64 (78%) Frame = -2 Query: 444 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 265 MA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG LMPNIGYG Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYG 59 Query: 264 SNKR 253 S+K+ Sbjct: 60 SDKK 63 >08_02_1315 + 26083856-26083945,26084093-26084226,26084753-26084819, 26085011-26085192,26085315-26085444 Length = 200 Score = 107 bits (258), Expect = 5e-24 Identities = 52/72 (72%), Positives = 59/72 (81%) Frame = -1 Query: 259 QETRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 80 ++TRH LPN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VT Sbjct: 129 KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVT 188 Query: 79 NAAARLRSQENE 44 N ARLRSQE+E Sbjct: 189 NKLARLRSQEDE 200 Score = 58.4 bits (135), Expect = 4e-09 Identities = 23/32 (71%), Positives = 30/32 (93%) Frame = -2 Query: 348 NWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKR 253 +WR+P+GID+RVRR+FKG LMPNIGYGS+K+ Sbjct: 99 SWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKK 130 Score = 29.9 bits (64), Expect = 1.7 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -2 Query: 444 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 352 MA+ P+ IVKKR K+F R SDRY LK Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYLCLK 30 >09_04_0633 - 19123930-19124009,19124240-19124344,19124453-19124543, 19124647-19124709,19126318-19126368,19126878-19126962, 19127102-19127283,19128493-19128582 Length = 248 Score = 89.0 bits (211), Expect = 3e-18 Identities = 41/60 (68%), Positives = 49/60 (81%) Frame = -1 Query: 259 QETRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 80 ++TRH LPN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I ++ Sbjct: 62 KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVIS 121 Score = 84.6 bits (200), Expect = 6e-17 Identities = 40/64 (62%), Positives = 50/64 (78%) Frame = -2 Query: 444 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 265 MA+ P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG LMPNIGYG Sbjct: 1 MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYG 59 Query: 264 SNKR 253 S+K+ Sbjct: 60 SDKK 63 >09_04_0630 + 19104678-19105463,19106169-19106348,19107775-19107864, 19108777-19108958,19109968-19109974,19111763-19111833, 19112188-19112224,19112433-19112603 Length = 507 Score = 89.0 bits (211), Expect = 3e-18 Identities = 41/68 (60%), Positives = 53/68 (77%) Frame = -2 Query: 456 ETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPN 277 +TY+M + P+ IVKKR K+F R SDRY LK +WR+P+GID+RVRR+FKG LMPN Sbjct: 319 DTYEMVV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPN 377 Query: 276 IGYGSNKR 253 IGYGS+K+ Sbjct: 378 IGYGSDKK 385 Score = 48.4 bits (110), Expect = 5e-06 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = -1 Query: 259 QETRHMLPNGFRKVLVHNVKELEILMMQNR 170 ++TRH LPN F+K +VHNV ELE+LMM NR Sbjct: 384 KKTRHYLPNKFKKFVVHNVSELELLMMHNR 413 >10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789, 21500187-21500418,21500488-21500668,21501342-21501438, 21501641-21501779,21502024-21502351,21502890-21503137, 21503270-21503543,21504200-21504291,21504451-21504521, 21505091-21505181,21506526-21507380,21507482-21507594, 21508007-21508074,21508655-21508835,21509084-21509186, 21509273-21509379,21510046-21511584,21511661-21511771, 21511856-21511908,21511988-21512063,21512147-21512366, 21512477-21512901,21513193-21513372,21513503-21515474 Length = 2680 Score = 30.3 bits (65), Expect = 1.3 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 460 KKRDSEPRGDTAAREGKKKKTRGGA 534 ++R+ P AA +GKKKK +GGA Sbjct: 2638 QRRNESPAAAAAANKGKKKKKKGGA 2662 >05_05_0377 - 24498664-24500215,24500306-24500643 Length = 629 Score = 28.7 bits (61), Expect = 4.0 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Frame = +1 Query: 214 LGPYGIHLGAYDGSLVGTVTDVGHQVL--TLESPADSVVNTSRFTPIPLKFVIAIRLMPD 387 L P+G L Y T GH VL L SPA TP+P L + Sbjct: 472 LAPFGASLVEYTSYADTATTIPGHYVLFWELRSPAGG-------TPVPASVFEDCCLAVE 524 Query: 388 KSLRPLFDDCRPVNRSYSHL 447 + L ++ CR +RS L Sbjct: 525 EGLNSVYRQCRAADRSIGPL 544 >01_01_1171 - 9321652-9321712,9322997-9323199 Length = 87 Score = 28.7 bits (61), Expect = 4.0 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 418 RPVNRSYSH-LVCFFKKRDSEPRGDTAAREGKKKKTRGGARYPIRPIVSRITIHWP 582 RP++R +H LV D + +G +G ++ + G R P +TI WP Sbjct: 27 RPMHRGLNHMLVDAVVHHDDDLQGRGYGEKGIEEAGQAGQRSFAEPDADAVTIRWP 82 >08_02_1238 + 25486263-25487574,25488210-25489117 Length = 739 Score = 28.3 bits (60), Expect = 5.2 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = +2 Query: 104 GSFHDQLPLL----RRDTVSDLCAVLPVLHHQ 187 G+ H+Q P L RRD V+D+ A L +HH+ Sbjct: 466 GAVHEQRPALSWESRRDIVADVAAGLHYVHHE 497 >03_06_0656 - 35330109-35331011,35331154-35331360,35331455-35331632, 35331726-35332221,35332889-35333033 Length = 642 Score = 28.3 bits (60), Expect = 5.2 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 262 QQETRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVS-SKKRKLIVERAQQ 98 ++E + M + KVL K LE + RK AE+ G+ +K+KL E A + Sbjct: 269 EEERKDMTLEEYEKVLEEKRKALEDSKSEGRKVTAEVFEGMQLLEKKKLDDENASK 324 >11_06_0696 + 26358713-26359779,26359826-26360110,26360177-26360356, 26360516-26360585,26361051-26361950 Length = 833 Score = 27.5 bits (58), Expect = 9.2 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -2 Query: 306 RFKGQYLMPNIGYGSNKRPVICSQMDSVRS*FTMLK 199 RFKG L+PN S+++ CS + S+ S F+ ++ Sbjct: 83 RFKGSVLLPNYPMSSSRKSTACSGL-SLSSCFSNIR 117 >10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018 Length = 1040 Score = 27.5 bits (58), Expect = 9.2 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +1 Query: 193 PAL*HCELGPYGIHLGAYDGSLVGTVTDVGHQVLTLESPADSVVNT 330 PA+ HC+L P I LG DG +V V D G + + + ++N+ Sbjct: 869 PAIVHCDLKPSNILLG--DG-MVAHVGDFGLAKILTDPEGEQLINS 911 >10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676 Length = 1098 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = +1 Query: 415 CRPVNRSYSHLVCFFKKRDSEPRGDTAAREGKKKKTR 525 CRP N+ + + F RDS+ + + E K K R Sbjct: 444 CRPENKDLLYPISFLSPRDSKELFNRSVSESKSTKDR 480 >07_01_0025 - 172742-173260,174559-174621,174701-174763,174852-174950, 175792-175818,175946-176251 Length = 358 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -3 Query: 515 FFFPSRAAVSPRGSLSRF 462 F+FPS +SPR SLSRF Sbjct: 36 FYFPSLIPLSPRISLSRF 53 >04_03_0362 + 14934236-14934541,14935549-14935647,14935736-14935798, 14935878-14935940,14937242-14937362,14937472-14937872, 14937968-14938141,14938252-14938570,14938659-14938735, 14938808-14938877,14938951-14939007,14939100-14939314, 14939436-14939561,14939649-14939944,14940032-14940203, 14940300-14940398,14940471-14940602,14940692-14940792, 14941391-14941580,14941819-14941842 Length = 1034 Score = 27.5 bits (58), Expect = 9.2 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -3 Query: 515 FFFPSRAAVSPRGSLSRF 462 F+FPS +SPR SLSRF Sbjct: 36 FYFPSLIPLSPRISLSRF 53 >03_02_0203 + 6370729-6370850,6371213-6371391,6371516-6371625, 6372721-6373575 Length = 421 Score = 27.5 bits (58), Expect = 9.2 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -3 Query: 152 RSRCLFEEAEADRGKSPAAQHQSDECGRSPPVP 54 RS ++A+RG SPAA H D SP P Sbjct: 40 RSSTSRRHSDANRGNSPAAPHSLDIYISSPAAP 72 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,017,098 Number of Sequences: 37544 Number of extensions: 324164 Number of successful extensions: 1091 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1091 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1513903616 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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