BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30348 (625 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 96 2e-20 Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 31 0.88 AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 28 4.7 U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 28 6.2 AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 28 6.2 AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 28 6.2 AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 28 6.2 Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 27 8.2 U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 27 8.2 >Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical protein T24B8.1 protein. Length = 134 Score = 95.9 bits (228), Expect = 2e-20 Identities = 44/72 (61%), Positives = 60/72 (83%) Frame = -1 Query: 259 QETRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 80 + TR +LPNG++KVLV NVK+L++L+MQ+ KY EI HGVS+K RK IVERA QL+I++T Sbjct: 63 RRTRFVLPNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLT 122 Query: 79 NAAARLRSQENE 44 N ARLR++E+E Sbjct: 123 NGNARLRTEESE 134 Score = 79.4 bits (187), Expect = 2e-15 Identities = 32/54 (59%), Positives = 44/54 (81%) Frame = -2 Query: 414 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKR 253 +VKK+ +F RH+SDRY ++ +WRKP+GIDNRVRRRF+G MP IG+GS++R Sbjct: 11 VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRR 64 >Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein K07G5.3 protein. Length = 1202 Score = 30.7 bits (66), Expect = 0.88 Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 3/92 (3%) Frame = +1 Query: 301 ESPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLVCFFKKRD-- 471 E P +S+ T R++ +P +++ +R+ ++ ++ FD+ R HLV + R+ Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLVAARQLREIL 1117 Query: 472 SEPRGDTAAREGKKKKTRGGARYPIRPIVSRI 567 PRG T + +++ R Y + I+ R+ Sbjct: 1118 ENPRGITES-SVEERIVRLKEGYELTVIIIRV 1148 >AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucuronosyltransferase protein20 protein. Length = 529 Score = 28.3 bits (60), Expect = 4.7 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = +1 Query: 157 LRSTSCFASSRFPAL*HCELGPYGIHLGAYDGSLVGTVTDVGHQVLTLESPADSVVNTS 333 L S CFASS + L + L +G + G+ T+TD GH V L D + TS Sbjct: 7 LFSAICFASS-YKILFYTNL--FGHSHVKFLGAAADTLTDAGHNVTVLIPVFDKALKTS 62 >U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. Length = 355 Score = 27.9 bits (59), Expect = 6.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 436 YSHLVCFFKKRDSEPRGDTAARE 504 YSHL +F + D PR AARE Sbjct: 281 YSHLADYFPEYDGPPRDPIAARE 303 >AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G protein alphasubunit protein. Length = 355 Score = 27.9 bits (59), Expect = 6.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 436 YSHLVCFFKKRDSEPRGDTAARE 504 YSHL +F + D PR AARE Sbjct: 281 YSHLADYFPEYDGPPRDPIAARE 303 >AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying defective protein 30,isoform b protein. Length = 303 Score = 27.9 bits (59), Expect = 6.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 436 YSHLVCFFKKRDSEPRGDTAARE 504 YSHL +F + D PR AARE Sbjct: 229 YSHLADYFPEYDGPPRDPIAARE 251 >AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying defective protein 30,isoform a protein. Length = 355 Score = 27.9 bits (59), Expect = 6.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 436 YSHLVCFFKKRDSEPRGDTAARE 504 YSHL +F + D PR AARE Sbjct: 281 YSHLADYFPEYDGPPRDPIAARE 303 >Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical protein E02H4.1 protein. Length = 664 Score = 27.5 bits (58), Expect = 8.2 Identities = 20/77 (25%), Positives = 31/77 (40%) Frame = +1 Query: 82 SL*C*AAGLFPRSASASSKRHRERSLRSTSCFASSRFPAL*HCELGPYGIHLGAYDGSLV 261 SL C ++ S +E+ + F S+ FPA+ C L P+ HL A + Sbjct: 74 SLVCICLCMYSFSHVKDKYDRKEKIVNVELVFESAPFPAITVCNLNPFKNHL-ARSVPEI 132 Query: 262 GTVTDVGHQVLTLESPA 312 D HQ + + A Sbjct: 133 SETLDAFHQAVVYSNDA 149 >U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. Length = 664 Score = 27.5 bits (58), Expect = 8.2 Identities = 20/77 (25%), Positives = 31/77 (40%) Frame = +1 Query: 82 SL*C*AAGLFPRSASASSKRHRERSLRSTSCFASSRFPAL*HCELGPYGIHLGAYDGSLV 261 SL C ++ S +E+ + F S+ FPA+ C L P+ HL A + Sbjct: 74 SLVCICLCMYSFSHVKDKYDRKEKIVNVELVFESAPFPAITVCNLNPFKNHL-ARSVPEI 132 Query: 262 GTVTDVGHQVLTLESPA 312 D HQ + + A Sbjct: 133 SETLDAFHQAVVYSNDA 149 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,241,670 Number of Sequences: 27780 Number of extensions: 263848 Number of successful extensions: 875 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 826 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 875 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1363963182 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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