Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30347
         (344 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   0.88 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   6.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 0.88
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 263 WLTFLLHFGTAFWRCAGR 210
           +L F+LH     WRC  R
Sbjct: 149 FLNFMLHCNNTTWRCLYR 166


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 207 VGPRCDSDV 181
           VGPRC+ D+
Sbjct: 291 VGPRCEGDI 299


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 311 YCTILHKLIVDDFHACWLTFLLHFGTAF 228
           YC ++  L +  F   ++ F  HF  AF
Sbjct: 289 YCALIILLCIYYFCRAFIIFPTHFYCAF 316


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/31 (22%), Positives = 15/31 (48%)
 Frame = -1

Query: 317 IIYCTILHKLIVDDFHACWLTFLLHFGTAFW 225
           + + T+ H  I+     C++  L++    FW
Sbjct: 202 VTHITMAHFKIIQVVPYCYINCLIYLIGGFW 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,350
Number of Sequences: 336
Number of extensions: 1398
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)