Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30346
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 80 2e-15
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 76 3e-14
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 75 4e-14
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 68 8e-12
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 58 6e-09
AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 48 7e-06
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 33 0.21
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 29 3.4
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 29 3.4
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 29 4.5
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 28 7.9
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 28 7.9
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +2
Query: 215 WKIASVQHEVLPLPQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDV 394
W + +QH +LP+ QR ++ + K I +V+N+ L +KP+W +K +VP +E E
Sbjct: 17 WNHSYLQHAILPVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGK 76
Query: 395 T-IYESLVTVEYLDEVYPKRPLLPQDPLKKALDKIIVE 505
+ ES V EYLD++YP+ +LP DP +K K++++
Sbjct: 77 KHVIESAVIPEYLDDIYPETRILPTDPYEKVQQKLLLD 114
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +2
Query: 215 WKIASVQHEVLPLPQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDV 394
W + +QH +LP+ QR ++ + K I +V+N+ L +KP+W +K +VP +E E
Sbjct: 17 WNHSYLQHAILPVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGK 76
Query: 395 T-IYESLVTVEYLDEVYPKRPLLPQDPLKKALDKIIVE 505
+ ES V EYLD++YP+ +LP DP +K K++++
Sbjct: 77 KHVIESAVIPEYLDDIYPETRILPTDPYEKVQQKLLLD 114
Score = 67.7 bits (158), Expect = 8e-12
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 PLPQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDVTI-YESLVTVE 424
P QR ++ + K+I EV+NI L KP+W TK +VPA+E E I ES V E
Sbjct: 319 PWAQRALIFASLKKIPTEVINIHLDQKPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPE 378
Query: 425 YLDEVYPKRPLLPQDPLKKALDKIIVE 505
YLD++YP+ ++P D +K K++++
Sbjct: 379 YLDDIYPEPRIIPTDHYEKVQQKLLLD 405
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
Frame = +3
Query: 171 NTKHLRKGDPLP--PFNGKLRVYNMRYCPY 254
NTK ++ GDP P P +G +R+YNMRYCP+
Sbjct: 291 NTKVVKNGDPAPAPPASGTIRIYNMRYCPW 320
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 75.8 bits (178), Expect = 3e-14
Identities = 39/86 (45%), Positives = 53/86 (61%)
Frame = +2
Query: 248 PLPQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDVTIYESLVTVEY 427
P QR ++ L K I EVVN++ P W KS +VPA+EI V ++ES V VEY
Sbjct: 108 PYAQRVLIYLAKKNIPVEVVNVNPDRSPNWYLPKSPIGRVPALEINGKV-VWESNVIVEY 166
Query: 428 LDEVYPKRPLLPQDPLKKALDKIIVE 505
LDE++P +LP+D +KA KI+VE
Sbjct: 167 LDELFPTNTILPRDAYEKAHQKILVE 192
Score = 35.5 bits (78), Expect = 0.039
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3
Query: 645 GSEPGYADYMIWPWFEKLR 701
G +PGYADY++WP+ E+L+
Sbjct: 239 GRQPGYADYLMWPFLERLQ 257
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 120 VPFRNMSAIKDSRNIN-FNTKHLRKGDPLPPFN-GKLRVYNMRYCPYLSEPF*LLTRNKL 293
VP R S NI N+ L G PP G R+Y+MR+CPY L + +
Sbjct: 63 VPIRFSSYSSVGSNIRGLNSPTLHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNI 122
Query: 294 TMRL 305
+ +
Sbjct: 123 PVEV 126
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 75.4 bits (177), Expect = 4e-14
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 PLPQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAE-DVTIYESLVTVE 424
P QR ++ + K+I EV+NI+L KP+W TK+ +VP +E AE + ES V E
Sbjct: 36 PAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPE 95
Query: 425 YLDEVYPKRPLLPQDPLKKALDKIIVE 505
YLD+++P+ +LP DP +K K+++E
Sbjct: 96 YLDDIFPETKILPSDPYEKVQQKLLLE 122
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 171 NTKHLRKGD--PLPPFNGKLRVYNMRYCP 251
N+K L+ GD P P R+Y+MR+CP
Sbjct: 8 NSKALKTGDLPPPSPSPNTFRIYSMRFCP 36
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 67.7 bits (158), Expect = 8e-12
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 PLPQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDVTI-YESLVTVE 424
P QR ++ + K+I EV+NI L KP+W TK +VPA+E E I ES V E
Sbjct: 36 PWAQRALIFASLKKIPTEVINIHLDQKPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPE 95
Query: 425 YLDEVYPKRPLLPQDPLKKALDKIIVE 505
YLD++YP+ ++P D +K K++++
Sbjct: 96 YLDDIYPEPRIIPTDHYEKVQQKLLLD 122
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
Frame = +3
Query: 171 NTKHLRKGDPLP--PFNGKLRVYNMRYCPY 254
NTK ++ GDP P P +G +R+YNMRYCP+
Sbjct: 8 NTKVVKNGDPAPAPPASGTIRIYNMRYCPW 37
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +2
Query: 248 PLPQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDVTIYESLVTVEY 427
P +R +L + AK I+ EVVN+++ DK EW TK K PA+E V I ES EY
Sbjct: 34 PWAERAMLYVAAKGIEAEVVNLNVTDKLEWYWTKHYQGKAPAVEHNGKVVI-ESGFIPEY 92
Query: 428 LDEVYPKRPLLPQDPLKKALDKIIVE 505
LD+ +P+ +LP DP +K K++ +
Sbjct: 93 LDDAFPETRILPTDPYEKVQQKLLAD 118
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 174 TKHLRKGDPLPPFN-GKLRVYNMRYCPY 254
+K +RKGD PP + G RVYNMR+CP+
Sbjct: 8 SKAIRKGDAEPPLSKGSFRVYNMRFCPW 35
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 645 GSEPGYADYMIWPWFEKL 698
GS+PGY DY+ +P+FEK+
Sbjct: 165 GSQPGYPDYLSFPFFEKI 182
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 RTILALNAKQIDYEVVNIDLIDKPEWLTTK--SAFAKVPAIEIAEDVTIYESLVTVEYLD 433
R +AL K +DYE +DL+ + K + AKVP + + I ESL +EYL+
Sbjct: 19 RVRIALALKNVDYEYKTVDLLSEEAKSKLKEINPAAKVPTF-VVDGQVITESLAIIEYLE 77
Query: 434 EVYPKRPLLPQDPLKKA 484
E +P PLLP+DP+K+A
Sbjct: 78 ETHPDVPLLPKDPIKRA 94
>AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical
protein Y53G8B.1 protein.
Length = 213
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 RTILALNAKQIDYEVVNIDLIDKP--EWLTTKSAFAKVPAIEIAEDVTIYESLVTVEYLD 433
RT LAL K+IDYE ++L++K + + KVP ++I +T+ ES+ +EYLD
Sbjct: 20 RTALAL--KKIDYEYQPVNLLNKQKEQEFHGNNPAEKVPILKI-NGLTLTESMAIIEYLD 76
Query: 434 EVYPKRPLLPQDPLKKALDKII 499
E+YP PLLP++P KA + I
Sbjct: 77 EIYPDPPLLPKEPELKARARAI 98
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 48.0 bits (109), Expect = 7e-06
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +2
Query: 260 RTILALNAKQIDYEVVNIDLIDKP-----EWLTTKSAFAKVPAIEIAEDVTIYESLVTVE 424
R +AL K IDYE IDL + E++ A KVP + I +++ ESL +E
Sbjct: 17 RVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPA-KKVPTLVI-NGLSLTESLAIIE 74
Query: 425 YLDEVYPKRPLLPQDPLKKALDKII 499
YLDE YP P LP++ K++ + I
Sbjct: 75 YLDEAYPDPPFLPKELDKRSYSRAI 99
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 120 VPFRNMSAIKDSRNIN-FNTKHLRKGDPLPPFN-GKLRVYNMRYCPY 254
VP R S NI N+ L G PP G R+Y+MR+CPY
Sbjct: 63 VPIRFSSYSSVGSNIRGLNSPTLHPGSIEPPLTPGNYRLYSMRFCPY 109
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/108 (25%), Positives = 44/108 (40%)
Frame = -1
Query: 728 SHSFIMGKCSKLLEPRPYHIISVSRFASVQNTVPRFFNCSWMKSKALWYAATCSSLTVSE 549
SHS + K L+ Y + +V P+FF CS K + AA S+ + SE
Sbjct: 1684 SHSTSLDK--NLVASEDYELDAVVIIVDNNTEQPQFFRCSCTKEASTSAAAALSAGSKSE 1741
Query: 548 NFRIFIKSD*IGAVLLQ*FCPMLSSKDLAAVKAFSDRPHLNIQLSLSF 405
+ +I + +G C S ++ V D H +I + S+
Sbjct: 1742 SCKIVRLASNLGHPTSLVLCESSSVQETNNVHYQRDEHHEHISETKSY 1789
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/108 (25%), Positives = 44/108 (40%)
Frame = -1
Query: 728 SHSFIMGKCSKLLEPRPYHIISVSRFASVQNTVPRFFNCSWMKSKALWYAATCSSLTVSE 549
SHS + K L+ Y + +V P+FF CS K + AA S+ + SE
Sbjct: 6530 SHSTSLDK--NLVASEDYELDAVVIIVDNNTEQPQFFRCSCTKEASTSAAAALSAGSKSE 6587
Query: 548 NFRIFIKSD*IGAVLLQ*FCPMLSSKDLAAVKAFSDRPHLNIQLSLSF 405
+ +I + +G C S ++ V D H +I + S+
Sbjct: 6588 SCKIVRLASNLGHPTSLVLCESSSVQETNNVHYQRDEHHEHISETKSY 6635
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 398 IYESLVTVEYLDEVYPKRPLLPQDPLKKALDKI 496
++ S EYL+++ P RP+LP P A + +
Sbjct: 430 LHGSSTPFEYLEDIEPPRPILPSIPYPSATNPL 462
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 248 PLPQRTILALNAK-QIDYEVVNIDLIDKPEWLTTKSAFAKVPA 373
P+ T++ ++ + + DYE N++++ E LT KS VPA
Sbjct: 1172 PIYHPTMMGVDPRTEYDYETQNVNMLISDEDLTMKSGSIGVPA 1214
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 248 PLPQRTILALNAK-QIDYEVVNIDLIDKPEWLTTKSAFAKVPA 373
P+ T++ ++ + + DYE N++++ E LT KS VPA
Sbjct: 1316 PIYHPTMMGVDPRTEYDYETQNVNMLISDEDLTMKSGSIGVPA 1358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,062,244
Number of Sequences: 27780
Number of extensions: 328977
Number of successful extensions: 831
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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