Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30345
(557 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellul... 171 7e-42
UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellu... 162 4e-39
UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3; Eukaryo... 120 3e-26
UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10; Therm... 104 2e-21
UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7; Archae... 102 5e-21
UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36; Archa... 101 2e-20
UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2; Thermoprote... 96 4e-19
UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|R... 79 9e-14
UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S riboso... 69 6e-11
UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcu... 65 9e-10
UniRef50_Q9UX96 Cluster: Putative uncharacterized protein ORF-c1... 64 2e-09
UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14; ... 62 6e-09
UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellu... 61 1e-08
UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellu... 60 3e-08
UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellu... 58 1e-07
UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38... 56 4e-07
UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellul... 55 1e-06
UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14; ... 54 2e-06
UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthu... 52 7e-06
UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14, puta... 49 6e-05
UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacte... 48 2e-04
UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor; ... 47 3e-04
UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4; Aconoi... 47 3e-04
UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria g... 45 0.001
UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7; Pezizom... 45 0.001
UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1; Croceib... 44 0.002
UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2; Bacteri... 40 0.030
UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosi... 40 0.052
UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas ... 39 0.069
UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14... 39 0.069
UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1; Pseudendocl... 35 1.1
UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14... 34 2.0
UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1; Cyanidi... 33 3.4
UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria r... 33 3.4
UniRef50_A2BGS3 Cluster: Novel protein similar to vertebrate tra... 33 4.5
UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmi... 33 4.5
UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.... 33 6.0
UniRef50_A6SKE4 Cluster: High mobility group protein; n=2; Scler... 33 6.0
UniRef50_Q6BZ91 Cluster: Debaryomyces hansenii chromosome A of s... 32 7.9
>UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellular
organisms|Rep: 60S ribosomal protein L23 - Drosophila
melanogaster (Fruit fly)
Length = 140
Score = 171 bits (417), Expect = 7e-42
Identities = 81/84 (96%), Positives = 81/84 (96%)
Frame = +1
Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
NRLPAAG G M VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK
Sbjct: 50 NRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 109
Query: 436 GEMKGSAITGPVAKECADLWPRIA 507
GEMKGSAITGPVAKECADLWPRIA
Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133
Score = 94.3 bits (224), Expect = 2e-18
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +2
Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253
MSKRGRGG+AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV GI+GR
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGR 48
>UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellular
organisms|Rep: 60S ribosomal protein L23 - Homo sapiens
(Human)
Length = 140
Score = 162 bits (394), Expect = 4e-39
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +1
Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK
Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109
Query: 436 GEMKGSAITGPVAKECADLWPRIA 507
GEMKGSAITGPVAKECADLWPRIA
Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133
Score = 97.1 bits (231), Expect = 2e-19
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +2
Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48
>UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3;
Eukaryota|Rep: 60S ribosomal protein L23 -
Encephalitozoon cuniculi
Length = 146
Score = 120 bits (288), Expect = 3e-26
Identities = 55/95 (57%), Positives = 71/95 (74%)
Frame = +1
Query: 223 CDRCPRYQRSPNRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYF 402
C RY+ NRLPAA G + V +VKKGKPELRKKV A++IRQ+K +RR DG I F
Sbjct: 45 CIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMF 104
Query: 403 EDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIA 507
EDNA V++NNKGE++G+ I GPV +E AD+WP+I+
Sbjct: 105 EDNAAVLINNKGELRGAQIAGPVPREVADMWPKIS 139
Score = 36.3 bits (80), Expect = 0.48
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 146 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRRTDCRRPVPG 283
+++++ G+ V ++ CADN+GAK L I V+ +GR PG
Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPG 64
>UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10;
Thermoprotei|Rep: 50S ribosomal protein L14P -
Pyrobaculum aerophilum
Length = 144
Score = 104 bits (249), Expect = 2e-21
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +1
Query: 259 RLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 438
R+P AG G M+V V++GKPELRK++ A+V+RQR+P+RR DG ++ FEDNA VIV +G
Sbjct: 55 RIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEG 114
Query: 439 EMKGSAITGPVAKECADLWPRIA 507
+ KGS I GPVA E WP IA
Sbjct: 115 DPKGSEIHGPVAMEATLRWPTIA 137
Score = 33.5 bits (73), Expect = 3.4
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MSKRGRGGSAGA--KFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRRTDCRRPVPG 283
M+KRG + G +F ++ G+ + +++ ADN+GAK + VI V G + R P G
Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAG 60
>UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7;
Archaea|Rep: 50S ribosomal protein L14P - Pyrococcus
horikoshii
Length = 141
Score = 102 bits (245), Expect = 5e-21
Identities = 48/88 (54%), Positives = 65/88 (73%)
Frame = +1
Query: 241 YQRSPNRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 420
Y + RL +AG G M+VATVKKG+P++R +V+ AV+IRQRK +RR DG+ + FEDNA V
Sbjct: 46 YHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAV 105
Query: 421 IVNNKGEMKGSAITGPVAKECADLWPRI 504
IV +G +G+ I GPVA+E A+ W RI
Sbjct: 106 IVTPEGVPRGTEIRGPVAREAAEKWVRI 133
Score = 39.1 bits (87), Expect = 0.069
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 110 MSKRGRGGSAG-AKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRR 256
M+K+G G + G + R + +P+GA + ADN+GAK + VI V G R
Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTR 50
>UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36;
Archaea|Rep: 50S ribosomal protein L14P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 132
Score = 101 bits (241), Expect = 2e-20
Identities = 47/95 (49%), Positives = 68/95 (71%)
Frame = +1
Query: 238 RYQRSPNRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 417
+Y+ NR+P AG G M V +VKKG PE+RK+++ AVV+RQ++ FRR DG+ + FEDNA
Sbjct: 36 KYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAM 95
Query: 418 VIVNNKGEMKGSAITGPVAKECADLWPRIA*TRAL 522
VI + G KG+ I GPVA+E A+ +P+I T ++
Sbjct: 96 VITDEDGIPKGTDIKGPVAREVAERFPKIGTTASI 130
Score = 33.9 bits (74), Expect = 2.6
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 140 GAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRRTDCRRPVPG 283
G + I L GA I C DNTGAK + +I+V+ +G + R P G
Sbjct: 3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKN--RMPCAG 48
>UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2;
Thermoprotei|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum
Length = 144
Score = 96.3 bits (229), Expect = 4e-19
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +1
Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
+RLPAA G + VKKG ELRK+V AV+IRQ+ P RR +GV + FEDNA V+ +
Sbjct: 54 SRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPE 113
Query: 436 GEMKGSAITGPVAKECADLWPRIA 507
GEMKG+ I GPVA E ++ WPR+A
Sbjct: 114 GEMKGTDIKGPVAAEASEKWPRLA 137
Score = 42.3 bits (95), Expect = 0.007
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2
Query: 119 RGRGGSAGAK-FR--ISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253
R RG + G + FR ++ LPVGA + CADN+GAK L +I VQ K R
Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTR 52
>UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|Rep:
Ribosomal protein L23 - Siniperca chuatsi (Chinese
perch)
Length = 46
Score = 78.6 bits (185), Expect = 9e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNL 220
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNL
Sbjct: 10 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNL 46
>UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S ribosomal
protein L23; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L23 - Macaca mulatta
Length = 98
Score = 69.3 bits (162), Expect = 6e-11
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +2
Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253
M KR GGS+ KFRISLGLP GAVIN AD+TGAK+LY+I+ +GI GR
Sbjct: 1 MLKRECGGSSSVKFRISLGLPAGAVINYADSTGAKSLYIISRKGINGR 48
Score = 32.3 bits (70), Expect = 7.9
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 256 NRLPAAGSGXMIVATVKKGKPELRKK 333
NRLPAA G M++ TVKK + +KK
Sbjct: 50 NRLPAADVGYMVITTVKKRQTRAQKK 75
>UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 148
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/83 (45%), Positives = 46/83 (55%)
Frame = -1
Query: 506 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFF 327
A GH S S ATGP+M+ PF+SP + T ALSSK TP L G+ CL+ TA T F
Sbjct: 14 ATLGHFSEASAATGPLMSVPFVSPSGVINTAALSSKQTLTPFNLRTGYFCLIITAPYTCF 73
Query: 326 RSSGLPFLTVATIMXPEPAAGSL 258
+S PF T P A G+L
Sbjct: 74 LNSAGPFFTTTLQKSPTDAEGNL 96
>UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcus
tauri|Rep: Ribosomal protein L23 - Ostreococcus tauri
Length = 93
Score = 65.3 bits (152), Expect = 9e-10
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +2
Query: 122 GRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQ 238
G G ++G K+++S GLPVGAV+NCADNTGAKNLY+IAV+
Sbjct: 45 GGGNASGTKYKMSYGLPVGAVVNCADNTGAKNLYMIAVK 83
>UniRef50_Q9UX96 Cluster: Putative uncharacterized protein
ORF-c10_023; n=2; Archaea|Rep: Putative uncharacterized
protein ORF-c10_023 - Sulfolobus solfataricus
Length = 107
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/92 (45%), Positives = 54/92 (58%)
Frame = -1
Query: 533 YSSDRARV*AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCL 354
Y+++ AR+ AI GH SA SLA GP+ + PF P +T ALSSK I+ PS LL G CL
Sbjct: 12 YTTNVARL-AIFGHLSAASLAIGPLTSVPFGVPSGFIITTALSSKEIHVPSGLLYGILCL 70
Query: 353 MTTAGITFFRSSGLPFLTVATIMXPEPAAGSL 258
TA F +SG+PFL + A G+L
Sbjct: 71 TITALNFCFLTSGVPFLIDTITISAMLANGTL 102
>UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14;
n=64; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Guillardia theta (Cryptomonas phi)
Length = 121
Score = 62.5 bits (145), Expect = 6e-09
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +1
Query: 271 AGSGXMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 441
A G +I+ VK P + R V+ AV++R + RR+DG+ I F+DNA VI+N +
Sbjct: 32 ASIGDVIIGVVKDATPNMPVKRSDVVRAVIMRTKNTIRRKDGMSIRFDDNAAVIINKENN 91
Query: 442 MKGSAITGPVAKECAD 489
+G+ + GP+A+E D
Sbjct: 92 PRGTRVFGPIARELRD 107
>UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellular
organisms|Rep: 50S ribosomal protein L14 - Deinococcus
radiodurans
Length = 134
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +1
Query: 280 GXMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 450
G +IVA+VK P K V+ AVV+R +R DG I F+ NA VI+NN+GE +G
Sbjct: 48 GDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRG 107
Query: 451 SAITGPVAKECAD 489
+ + GPVA+E D
Sbjct: 108 TRVFGPVARELRD 120
>UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellular
organisms|Rep: 50S ribosomal protein L14 - Leptospira
interrogans
Length = 130
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +1
Query: 310 GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 489
GK K V AVV+R K RR DG +I F+DNA I+++KG KG+ I GPVA+E D
Sbjct: 57 GKKVHNKAVQRAVVVRTTKEIRRPDGSYIRFDDNACAIIDDKGNPKGTRIFGPVARELRD 116
>UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellular
organisms|Rep: 50S ribosomal protein L14 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 122
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +1
Query: 271 AGSGXMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 441
AG G +I +VK+ P R K + AVV+R K RR+DG I F+ NA V++NNK E
Sbjct: 33 AGIGDIIKVSVKEATPRGRVKKGEIYNAVVVRTAKGVRRQDGSLIKFDGNAAVLLNNKLE 92
Query: 442 MKGSAITGPVAKE 480
G+ I GPV +E
Sbjct: 93 PIGTRIFGPVTRE 105
>UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38
(Yml38), putative; n=13; Dikarya|Rep: Mitochondrial 60s
ribosomal protein l38 (Yml38), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 149
Score = 56.4 bits (130), Expect = 4e-07
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +1
Query: 319 ELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 480
++RK + AVV+R +K +R DG + F+D+A V++NNKGEM G+ I GPVA E
Sbjct: 70 KIRKGDIRRAVVVRVKKTTQRPDGSVVRFDDSAAVLLNNKGEMLGTRIVGPVASE 124
>UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellular
organisms|Rep: 50S ribosomal protein L14 - Streptococcus
pneumoniae
Length = 122
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +1
Query: 271 AGSGXMIVATVKKGKP--ELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 441
A G +IVA+VK+ P ++K V+ AV++R + RR DG +I F++NA VI+
Sbjct: 33 ANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRADGSYIKFDENAAVIIREDKT 92
Query: 442 MKGSAITGPVAKE 480
+G+ I GPVA+E
Sbjct: 93 PRGTRIFGPVARE 105
>UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14;
n=151; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Arabidopsis thaliana (Mouse-ear cress)
Length = 122
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +1
Query: 232 CPRYQRSPNRLPAAGSGXMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYF 402
C R + NR A G +IVA +K+ P R +V+ AV++R K +R +G I +
Sbjct: 21 CIRIIGASNRR-YAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKRNNGTIIRY 79
Query: 403 EDNAGVIVNNKGEMKGSAITGPVAKECADL 492
+DNA V+++ +G KG+ + G + +E L
Sbjct: 80 DDNAAVVIDQEGNPKGTRVFGAIPRELRQL 109
>UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthus
orientalis|Rep: HUELLENLOS-like protein - Hyacinthus
orientalis (Common hyacinth)
Length = 171
Score = 52.4 bits (120), Expect = 7e-06
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +1
Query: 280 GXMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 450
G I+A+VK+ +P+ + K V+ VV+R P R DG I F+DNA V+VN +GE G
Sbjct: 85 GDTIIASVKEAQPKGKVKKGDVVYGVVVRAAMPRGRCDGSEIKFDDNAVVLVNKQGEPIG 144
Query: 451 SAITGPVAKE 480
+ + GPV E
Sbjct: 145 TRVFGPVPHE 154
>UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14,
putative; n=4; Aconoidasida|Rep: 50S ribosomal subunit
protein L14, putative - Plasmodium vivax
Length = 183
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/53 (39%), Positives = 38/53 (71%)
Frame = +1
Query: 322 LRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 480
+++K +++R++K +R+DG +I F+DNA VI+ +K ++K + I GPVA E
Sbjct: 119 IQEKTPKGIIVRRKKETKRKDGSYIKFDDNAFVII-SKNKLKATKIKGPVAME 170
>UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacter
autotrophicus Py2|Rep: Ribosomal protein L14 -
Xanthobacter sp. (strain Py2)
Length = 144
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +1
Query: 280 GXMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
G +IV +VK+ P R K VM AVV+R K RR DG I F+ NA V++NNK
Sbjct: 36 GDIIVVSVKEAIPRGRVKKGDVMKAVVVRTAKDIRRVDGSVIRFDRNAAVLINNK 90
>UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor;
n=1; Serratia proteamaculans 568|Rep: Ribosomal protein
L14b/L23e precursor - Serratia proteamaculans 568
Length = 119
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 334 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMK-GSAITGPVAKE 480
V+ AVV+R +K RR DG I F+ NA VI+NN E G+ I GPV +E
Sbjct: 53 VLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRE 102
>UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4;
Aconoidasida|Rep: LSU ribosomal protein L14P -
Plasmodium yoelii yoelii
Length = 124
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/51 (39%), Positives = 36/51 (70%)
Frame = +1
Query: 328 KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 480
+K +++R++K +R+DG +I F+DNA V++ +K ++K + I GPVA E
Sbjct: 62 EKTPKGIIVRRKKETKRKDGSYIKFDDNAFVMI-SKNKLKATKIKGPVAME 111
>UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria
gruberi|Rep: Ribosomal protein L14 - Naegleria gruberi
Length = 123
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +1
Query: 271 AGSGXMIVATVKKGKPELRKKVMP-----AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
A G IV +KK K + KV +++R +K +R +G+++ FEDNA V+++
Sbjct: 32 ASVGDYIVVAIKKVKMRKKMKVKMHDVRFGIIVRTKKNIKRYNGIYVSFEDNAMVLLDKN 91
Query: 436 GEMKGSAITGPVAKE 480
G+ I GP++ E
Sbjct: 92 LNPIGNRINGPLSYE 106
>UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7;
Pezizomycotina|Rep: 50S ribosomal protein L14 -
Botryotinia fuckeliana B05.10
Length = 134
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 325 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADL-WPR 501
R + AVV+R K +R DG + F+DNA V++N GE G+ + G V E + W +
Sbjct: 66 RGDIRHAVVVRTVKKLQRPDGSVVKFDDNACVLINKAGEPIGTRLNGVVGTELRKMKWSK 125
Query: 502 I 504
I
Sbjct: 126 I 126
>UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1;
Croceibacter atlanticus HTCC2559|Rep: 50S ribosomal
protein L14 - Croceibacter atlanticus HTCC2559
Length = 135
Score = 44.0 bits (99), Expect = 0.002
Identities = 32/76 (42%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -1
Query: 488 SAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSS 318
S SLATGP P ISP+ T ALSSK I PS L F TTA T
Sbjct: 27 SRSSLATGPKTRVPLISPVGFNNTHALSSKRIYEPSGLRTSFLVRTTTAVETAPFLIPPF 86
Query: 317 GLPFLTVATIMXPEPA 270
G+ T+ TI+ P A
Sbjct: 87 GVASFTLTTILSPTDA 102
>UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2;
Bacteria|Rep: 50S ribosomal protein L14 - Stappia
aggregata IAM 12614
Length = 147
Score = 40.3 bits (90), Expect = 0.030
Identities = 30/70 (42%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 479 SLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSSGLP 309
S TGP + P S LLLT T AL S I PS F TTA IT R G+
Sbjct: 46 SRGTGPKIRVPIGSLLLLTSTAALRSNRITLPSGRRISFAVRTTTAFITSPFLTRPRGIA 105
Query: 308 FLTVATIMXP 279
LT T+M P
Sbjct: 106 SLTETTMMSP 115
>UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosira
pseudonana|Rep: Ribosomal protein L14 - Thalassiosira
pseudonana (Marine diatom)
Length = 126
Score = 39.5 bits (88), Expect = 0.052
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Frame = +1
Query: 280 GXMIVATVKKGKPELRK-------KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 438
G +I+ +++K + + R +V AV+IR +K ++DG ++F+ N +++ +G
Sbjct: 36 GDIIIVSIQKLRNKARSTSKVQKGEVHKAVIIRTKKKTIKKDGTVVFFQSNVVSLISKQG 95
Query: 439 EMKGSAITGPVAK 477
+ S I GP+ K
Sbjct: 96 KPIASRIMGPIPK 108
>UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas
salina|Rep: Ribosomal protein L14 - Rhodomonas salina
(Cryptomonas salina)
Length = 113
Score = 39.1 bits (87), Expect = 0.069
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 304 KKGKPELRKKVMPAVVIRQRKPFR-RRDGVFIYFEDNAGVIVNNKGEMKGSAITGPV 471
KK K ++KK + I K F +++G+F+ F N V++N+K + G+ GPV
Sbjct: 37 KKSKTNIKKKSLFLAAIICEKIFNSKKNGIFVAFNKNNAVLLNSKNNLIGTRFFGPV 93
>UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14;
n=2; Dictyosteliida|Rep: Mitochondrial 60S ribosomal
protein L14 - Dictyostelium discoideum (Slime mold)
Length = 129
Score = 39.1 bits (87), Expect = 0.069
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Frame = +1
Query: 280 GXMIVATVKK------GKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNN 432
G IV +KK GK +L+ K V AV+++ ++P RR+ G+ + +N +++
Sbjct: 37 GDKIVVVIKKMEKRKGGKYKLKVKKSDVCYAVIVKSKQPVRRKSGIIVNAGENGVILLTK 96
Query: 433 KGEMKGSAITGPVAKE 480
E G+ +TG V KE
Sbjct: 97 TKEPIGTRLTGVVFKE 112
>UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein L14 -
Pseudendoclonium akinetum (Green alga)
Length = 129
Score = 35.1 bits (77), Expect = 1.1
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 229 RCPRYQRSPNRLPAAGSGXMIVATVKKGKPE-----LRK-----KVMPAVVIRQRKPFRR 378
+C + QRS G + ATVKKG + L+K ++ VVI+ + RR
Sbjct: 20 QCIQVQRSKKSQKPCKIGDFLKATVKKGSAKSQTQRLKKLTGSERLRNLVVIQTKSALRR 79
Query: 379 RDGVFIYFEDNAGVIVNNK 435
DG I F N G+ VN +
Sbjct: 80 LDGGAIRFNANCGITVNER 98
>UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L14 - Paramecium tetraurelia
Length = 119
Score = 34.3 bits (75), Expect = 2.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 280 GXMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 450
G I +++ KPE R K A+++R +RDG F F N V++ + G
Sbjct: 36 GDYIKVSIRSTKPECTIKRGKKKKAIIVRHAFGRLKRDGSFSKFSSNVCVLLKKRTAPLG 95
Query: 451 SAITGPV 471
I GP+
Sbjct: 96 REIKGPI 102
>UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L14 -
Cyanidioschyzon merolae (Red alga)
Length = 127
Score = 33.5 bits (73), Expect = 3.4
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +1
Query: 280 GXMIVATVK---KGKPELRKKVMP-----AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
G I+ T+K + +R K+ A+++R +K R D ++ F DN V+++NK
Sbjct: 36 GSTIIVTIKELYRSNNSVRSKIEKGIISHALIVRTKKKNRSLDNIWTNFIDNGVVLLDNK 95
Query: 436 GEMKGSAITGPV 471
+ + + GP+
Sbjct: 96 KSLMFTRVRGPI 107
>UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L14 - Cafeteria
roenbergensis
Length = 124
Score = 33.5 bits (73), Expect = 3.4
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 256 NRLPAAGSGXMI-VATVKKGKPELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVN 429
N+ GS ++ + ++ G ++ +V AV++R + + +DG F+ N V++
Sbjct: 30 NKTAVVGSLIVLSIRGIRSGSRRVKAGQVSLAVIVRTKAWTKFKDGSQSRFQRNCAVLLT 89
Query: 430 NKGEMKGSAITGPVAKE 480
K ++ G+ + GPV+++
Sbjct: 90 RKKQILGTKVFGPVSRQ 106
>UniRef50_A2BGS3 Cluster: Novel protein similar to vertebrate
transmembrane protein 116; n=3; Otophysi|Rep: Novel
protein similar to vertebrate transmembrane protein 116
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 361
Score = 33.1 bits (72), Expect = 4.5
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -1
Query: 491 RSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFFRSSGL 312
R+ + GPV++ + PLLLT ++ + +RCL+ G + SS
Sbjct: 140 RTRNCRCLGPVLS--CLLPLLLTAPVFVAGNVFQCYTNFTQPYRCLLMHTGAVYLTSSAS 197
Query: 311 PFLTVATIM 285
P LT +I+
Sbjct: 198 PELTACSII 206
>UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein L14 - Nephroselmis
olivacea
Length = 124
Score = 33.1 bits (72), Expect = 4.5
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +1
Query: 280 GXMIVATVKKGKPELRKK-----VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEM 444
G +IV T+KK + + K V V++ +K R+DG F+ N ++ +
Sbjct: 36 GDVIVVTIKKANSKYKGKATAGQVYRGVILETKKEVTRKDGSLFSFDRNVVALMTPQENP 95
Query: 445 KGSAITG 465
G+ ITG
Sbjct: 96 MGTRITG 102
>UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.27
- Arabidopsis thaliana (Mouse-ear cress)
Length = 201
Score = 32.7 bits (71), Expect = 6.0
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 301 VKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 450
+ KGK + + V+ VV+R P R DG + F+DNA V+V K E KG
Sbjct: 109 IPKGKVK-KGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIK-EKKG 156
>UniRef50_A6SKE4 Cluster: High mobility group protein; n=2;
Sclerotiniaceae|Rep: High mobility group protein -
Botryotinia fuckeliana B05.10
Length = 341
Score = 32.7 bits (71), Expect = 6.0
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 249 PLIPWTAITYRFFAPVLSAQLITAPTGRPREIRNFAPAEPPRPLLDILLYQNFER 85
PL+ R +P+++ TAP + R+ R P P RPL LY R
Sbjct: 82 PLLETLGALQRAASPIIAKAADTAPEKKERKKRQHDPNAPKRPLTPFFLYMQTAR 136
>UniRef50_Q6BZ91 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1323
Score = 32.3 bits (70), Expect = 7.9
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 128 GGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRRTDCRRPVPG 283
GG+ A++ S L ++N D G NL V + G+R C+ PVPG
Sbjct: 461 GGNEAARYTSSKDLAAIKLLNRIDAKGIYNL-VTCIVDYMGQRVICQAPVPG 511
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,136,527
Number of Sequences: 1657284
Number of extensions: 11729041
Number of successful extensions: 33716
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 32663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33710
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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