Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30345
(557 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 154 5e-38
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 154 5e-38
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 154 5e-38
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 54 8e-08
05_07_0365 - 29662703-29662710,29664321-29664378,29664675-296647... 30 1.4
07_03_1151 + 24385272-24386543 29 1.9
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 28 4.4
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 4.4
02_02_0500 - 10993675-10994067,10994434-10995738 28 4.4
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053... 28 5.8
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 28 5.8
05_07_0367 - 29700855-29700920,29701092-29701149,29701446-297015... 27 7.7
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 27 7.7
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 27 7.7
03_05_0446 - 24414351-24414427,24414491-24414881 27 7.7
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 27 7.7
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 27 7.7
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 154 bits (373), Expect = 5e-38
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +1
Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
NRLP+A G M++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN K
Sbjct: 50 NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPK 109
Query: 436 GEMKGSAITGPVAKECADLWPRIA 507
GEMKGSAITGP+ KECADLWPRIA
Sbjct: 110 GEMKGSAITGPIGKECADLWPRIA 133
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2
Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGR
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGR 48
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 154 bits (373), Expect = 5e-38
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +1
Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
NRLP+A G M++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN K
Sbjct: 50 NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPK 109
Query: 436 GEMKGSAITGPVAKECADLWPRIA 507
GEMKGSAITGP+ KECADLWPRIA
Sbjct: 110 GEMKGSAITGPIGKECADLWPRIA 133
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2
Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGR
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGR 48
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 154 bits (373), Expect = 5e-38
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +1
Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435
NRLP+A G M++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN K
Sbjct: 67 NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPK 126
Query: 436 GEMKGSAITGPVAKECADLWPRIA 507
GEMKGSAITGP+ KECADLWPRIA
Sbjct: 127 GEMKGSAITGPIGKECADLWPRIA 150
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 122 GRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253
GRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGR
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGR 65
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 280 GXMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 450
G I+ +VK+ +P + K V+ VV+R R DG I F+DNA V+VNNKGE+ G
Sbjct: 84 GDTIIGSVKEAQPRGKVKKGDVVYGVVVRAAMKRGRNDGSEIQFDDNAIVLVNNKGELIG 143
Query: 451 SAITGPVAKE 480
+ + GPV E
Sbjct: 144 TRVFGPVPHE 153
>05_07_0365 -
29662703-29662710,29664321-29664378,29664675-29664732,
29665029-29665086,29665737-29665794,29666091-29666134,
29666445-29666502,29666799-29666981,29667154-29667211,
29667508-29667565,29667862-29667919,29668216-29668259,
29668570-29668627,29668924-29669106,29669279-29669336,
29669633-29669676,29669987-29670044,29670341-29670398,
29670696-29670753,29671050-29671052
Length = 420
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 165 PREIRNFA-PAEPPRPLLDILLYQNFERNNR 76
P +IR FA P P+L IL Y F RNNR
Sbjct: 383 PSDIRCFAEPTAASWPMLWILRYSTFRRNNR 413
>07_03_1151 + 24385272-24386543
Length = 423
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3
Query: 210 APVLSAQLITAPTGRPREIRNFAPAEPPRPLLDILLYQNFERNNRDVKL 64
AP + P R R +R APA P P +LL FE+ DV L
Sbjct: 147 APAAVTVIAAPPRRRRRSMRVAAPAPAPAPPRPVLL-GGFEKEQEDVAL 194
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 403 EDNAGVIV--NNKGEMKGSAITGPVAKECAD 489
ED +I+ N+KG +GS ITG + + CA+
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCAE 745
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 210 APVLSAQLITAPTGRPREIRNFAPAEPPRP 121
AP S+ L TAP P + + FAP PP P
Sbjct: 328 APNASSSLFTAPV--PADRQQFAPPPPPSP 355
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 464 PVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTT---AGITFFR-SSGLPFLTV 297
P EP I+ + ++PA+ +T S + NG+ +M+T G+ F + SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 296 ATIMXPEPAA 267
+ EP A
Sbjct: 285 FKPIDEEPMA 294
>04_03_0795 -
19704354-19704464,19705152-19705214,19705298-19705378,
19705468-19705623,19705711-19705785,19706477-19706587,
19707206-19707304,19707453-19707546,19707779-19707838,
19709262-19709334,19711448-19711490,19711533-19711606,
19711985-19712075,19712170-19712214,19712533-19712589,
19713440-19713544,19713817-19713932,19714625-19714634,
19714810-19714920,19715502-19715594,19715664-19715690,
19715736-19715798,19716326-19716451,19716812-19716949,
19717164-19717832,19717949-19718123,19718269-19718450
Length = 1015
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 214 ESVCDRCPRYQRSPNRLPAAGSGXMIVATVKKGKPE--LRKKVMPAVVI 354
E +C C R+ +P A+GS V + KPE LR+ P +++
Sbjct: 184 ERICKLCRRHVTTPPSPGASGSSLHTVEIISVQKPEDLLRRFQFPELIV 232
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/54 (42%), Positives = 24/54 (44%)
Frame = -3
Query: 282 PGTGRRQSVRRPLIPWTAITYRFFAPVLSAQLITAPTGRPREIRNFAPAEPPRP 121
P T RR RRP P AI A VL AP RPR +R A PRP
Sbjct: 121 PSTSRR---RRPASPRAAIATSVEAVVL------APGRRPRSVRAEVVAIAPRP 165
>05_07_0367 -
29700855-29700920,29701092-29701149,29701446-29701503,
29701800-29701857,29702154-29702211,29702508-29702551,
29702840-29703022,29703192-29703249,29703545-29703602,
29703897-29703954,29704250-29704307,29704956-29705013,
29705310-29705367,29705664-29705721,29706348-29706398,
29706695-29706752,29707049-29707106,29707403-29707459,
29707754-29707810,29708085-29708135,29708431-29708507,
29708785-29708842,29709139-29709195,29709490-29709546,
29709821-29709893,29710167-29710224,29710521-29710578,
29710875-29710931,29711558-29711608,29711904-29711980,
29712258-29712315,29712612-29712669,29712966-29713016,
29713667-29713717,29714014-29714057,29714368-29714444,
29714722-29714779,29715076-29715126,29715423-29715480,
29715776-29715833,29716130-29716187,29716484-29716534,
29716831-29716907,29717185-29717242,29717539-29717589,
29718240-29718316,29718594-29718651,29718947-29719004,
29719301-29719351,29719648-29719705,29723277-29723334,
29723631-29723681,29724331-29724388,29724684-29724741,
29725038-29725088,29725385-29725442,29725738-29725814,
29726092-29726148,29726444-29726501,29726798-29726848,
29727070-29727075
Length = 1209
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 195 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 76
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 149 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 189
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 195 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 76
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 286 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 326
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 195 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 76
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 348 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 388
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 195 AQLITAPTGRPREIRNFAPAEPPR-PLLDILLYQNFERNNR 76
A+ A P +IR FA P+L L Y F RNNR
Sbjct: 423 AETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNR 463
>05_01_0029 +
187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 KPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKEC-ADLWPRI 504
KP D V + DN GV+V+ G GS+ +C A+++P +
Sbjct: 214 KPLSGGDEVMLLV-DNVGVVVDRSGHPVGSSFVFNTTPDCIAEVYPYV 260
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 420 DTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEFRFTLFDCGHN 289
+ I+++ Y+ T +R P P D + +F F L+DC +N
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNN 141
>03_05_0446 - 24414351-24414427,24414491-24414881
Length = 155
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 187 DYCSHWETQGDTEFRSRGTTTSSLRHFVV 101
D C + + D FR+RG T++SLR V+
Sbjct: 56 DDCEYGDHDDDRGFRARGFTSASLRSNVI 84
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 210 APVLSAQ-LITAPTGRPREIRNFAPAEPPRPLLDILLYQNFERNNRDVKLVTFA 52
AP+LS Q LI P+ E+ + PPR + I L R +RDV ++ F+
Sbjct: 778 APLLSVQALILPPSHLKTELSSVPDTIPPRAQVQIPLEVVNLRASRDVAVLDFS 831
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 201 LSAQLITAPTGRPREIRNFAPAEPP 127
++A+ TAP GRP + FAP+ PP
Sbjct: 345 VTARPTTAPGGRPPKRPAFAPSAPP 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,801,939
Number of Sequences: 37544
Number of extensions: 340885
Number of successful extensions: 1148
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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