BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30345 (557 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 163 5e-40 X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 162 7e-40 X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 162 7e-40 BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 162 7e-40 BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 162 7e-40 BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 162 7e-40 BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 162 7e-40 AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 162 7e-40 BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 97 4e-20 AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1... 29 8.4 AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein pr... 29 8.4 AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr... 29 8.4 AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. 29 8.4 >BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 163 bits (395), Expect = 5e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 >X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein protein. Length = 140 Score = 162 bits (394), Expect = 7e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 >X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 protein. Length = 140 Score = 162 bits (394), Expect = 7e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 >BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. Length = 140 Score = 162 bits (394), Expect = 7e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 >BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 162 bits (394), Expect = 7e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 >BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 162 bits (394), Expect = 7e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 >BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal protein L23 protein. Length = 134 Score = 162 bits (394), Expect = 7e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 44 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 103 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 104 GEMKGSAITGPVAKECADLWPRIA 127 Score = 85.0 bits (201), Expect = 2e-16 Identities = 38/42 (90%), Positives = 42/42 (100%) Frame = +2 Query: 128 GGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 GGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 42 >AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 162 bits (394), Expect = 7e-40 Identities = 75/84 (89%), Positives = 80/84 (95%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 435 NRLPAAG G M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNK 109 Query: 436 GEMKGSAITGPVAKECADLWPRIA 507 GEMKGSAITGPVAKECADLWPRIA Sbjct: 110 GEMKGSAITGPVAKECADLWPRIA 133 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 >BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. Length = 77 Score = 97.1 bits (231), Expect = 4e-20 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 110 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGR 253 MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGR Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGR 48 Score = 49.6 bits (113), Expect = 7e-06 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = +1 Query: 256 NRLPAAGSGXMIVATVKKGKPELRKK 333 NRLPAAG G M++ATVKKGKPELRKK Sbjct: 50 NRLPAAGVGDMVMATVKKGKPELRKK 75 >AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1 protein. Length = 1906 Score = 29.5 bits (63), Expect = 8.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 500 RGHRSAHSLATGPVMAEPFISPLLLTMTP 414 +G AH L+ GP+ P++ P LL +TP Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477 >AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein protein. Length = 568 Score = 29.5 bits (63), Expect = 8.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 500 RGHRSAHSLATGPVMAEPFISPLLLTMTP 414 +G AH L+ GP+ P++ P LL +TP Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139 >AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein protein. Length = 1285 Score = 29.5 bits (63), Expect = 8.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 500 RGHRSAHSLATGPVMAEPFISPLLLTMTP 414 +G AH L+ GP+ P++ P LL +TP Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856 >AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. Length = 1644 Score = 29.5 bits (63), Expect = 8.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 500 RGHRSAHSLATGPVMAEPFISPLLLTMTP 414 +G AH L+ GP+ P++ P LL +TP Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 78,498,453 Number of Sequences: 237096 Number of extensions: 1805133 Number of successful extensions: 6295 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 6136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6295 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 5590411794 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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