BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30344 (411 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 107 9e-23 UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 84 9e-16 UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 77 2e-13 UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 67 1e-10 UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 67 1e-10 UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 66 3e-10 UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 64 8e-10 UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 60 2e-08 UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 60 2e-08 UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 60 2e-08 UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 54 1e-06 UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 52 5e-06 UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 50 2e-05 UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 6e-05 UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 48 1e-04 UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 45 5e-04 UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 45 5e-04 UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 45 5e-04 UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 44 0.001 UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 43 0.002 UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 43 0.002 UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 43 0.003 UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 43 0.003 UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 41 0.011 UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 40 0.020 UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 39 0.034 UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 37 0.14 UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 37 0.18 UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 35 0.56 UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.74 UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 34 0.98 UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1; Halo... 34 0.98 UniRef50_A1D3E0 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9 UniRef50_Q10209 Cluster: Uncharacterized J domain-containing pro... 31 6.9 UniRef50_Q4RYN6 Cluster: Chromosome 16 SCAF14974, whole genome s... 31 9.1 UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 9.1 >UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein L36 (Protein minute(1)1B) - Drosophila melanogaster (Fruit fly) Length = 115 Score = 107 bits (257), Expect = 9e-23 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%) Frame = +3 Query: 15 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 191 MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59 Query: 192 HAQYEKRAMELLKVSKDKRAL 254 HA YEKR MELLKVSKDKRAL Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80 Score = 56.8 bits (131), Expect = 2e-07 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 340 K + +FLKRRLGTHIRAKRKREELSN+L Q+RK Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109 >UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Euteleostomi|Rep: 60S ribosomal protein L36 - Homo sapiens (Human) Length = 105 Score = 84.2 bits (199), Expect = 9e-16 Identities = 46/80 (57%), Positives = 55/80 (68%) Frame = +3 Query: 15 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 194 MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50 Query: 195 AQYEKRAMELLKVSKDKRAL 254 A YE+RAMELLKVSKDKRAL Sbjct: 51 APYERRAMELLKVSKDKRAL 70 Score = 54.4 bits (125), Expect = 9e-07 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 340 K + +F+K+R+GTHIRAKRKREELSNVLA MRK Sbjct: 65 KDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99 >UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36 - Leptinotarsa decemlineata (Colorado potato beetle) Length = 84 Score = 76.6 bits (180), Expect = 2e-13 Identities = 35/48 (72%), Positives = 39/48 (81%) Frame = +3 Query: 111 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 254 R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRAL Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRAL 50 Score = 55.2 bits (127), Expect = 5e-07 Identities = 26/35 (74%), Positives = 29/35 (82%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 340 K + +FLKRRLGTHIRAKRKREELSN+L QM K Sbjct: 45 KDKRALKFLKRRLGTHIRAKRKREELSNILTQMGK 79 >UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa subsp. japonica (Rice) Length = 143 Score = 67.3 bits (157), Expect = 1e-10 Identities = 39/78 (50%), Positives = 46/78 (58%) Frame = +3 Query: 21 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 200 P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55 Query: 201 YEKRAMELLKVSKDKRAL 254 YEKR ELLKV KDKRAL Sbjct: 56 YEKRITELLKVGKDKRAL 73 Score = 39.1 bits (87), Expect = 0.034 Identities = 16/25 (64%), Positives = 22/25 (88%) Frame = +2 Query: 263 KRRLGTHIRAKRKREELSNVLAQMR 337 KR+LGTH RAK+KREE++ V+ +MR Sbjct: 77 KRKLGTHKRAKKKREEMAGVIRKMR 101 >UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota (Carrot) Length = 106 Score = 67.3 bits (157), Expect = 1e-10 Identities = 41/102 (40%), Positives = 52/102 (50%) Frame = +3 Query: 21 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 200 P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55 Query: 201 YEKRAMELLKVSKDKRALSS*SDDWAHTSAPRGSVKNLATCS 326 YEKR ELLKV KDKRAL + H+ + + CS Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVGHSQESKEEERGDVQCS 97 >UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/Metazoa group|Rep: 60S ribosomal protein L36 - Caenorhabditis elegans Length = 104 Score = 66.1 bits (154), Expect = 3e-10 Identities = 34/74 (45%), Positives = 49/74 (66%) Frame = +3 Query: 33 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 212 +AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58 Query: 213 AMELLKVSKDKRAL 254 +E+L++SKDKRAL Sbjct: 59 VLEMLRISKDKRAL 72 Score = 44.8 bits (101), Expect = 7e-04 Identities = 21/35 (60%), Positives = 25/35 (71%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 340 K + +FLKRR+GTH RAK KREEL NV+ RK Sbjct: 67 KDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101 >UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia bovis Length = 116 Score = 64.5 bits (150), Expect = 8e-10 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 3/87 (3%) Frame = +3 Query: 3 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 182 + +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57 Query: 183 VVGHAQYEKRAMELLK---VSKDKRAL 254 V G A YE+ +EL+K S KRAL Sbjct: 58 VCGFAPYERHMIELIKTGSASAQKRAL 84 >UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis thaliana (Mouse-ear cress) Length = 113 Score = 60.1 bits (139), Expect = 2e-08 Identities = 35/72 (48%), Positives = 42/72 (58%) Frame = +3 Query: 39 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 218 VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61 Query: 219 ELLKVSKDKRAL 254 ELLKV KDKRAL Sbjct: 62 ELLKVGKDKRAL 73 Score = 42.7 bits (96), Expect = 0.003 Identities = 19/25 (76%), Positives = 23/25 (92%) Frame = +2 Query: 263 KRRLGTHIRAKRKREELSNVLAQMR 337 KR+LGTH RAKRKREE+S+VL +MR Sbjct: 77 KRKLGTHKRAKRKREEMSSVLRKMR 101 >UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus neoformans (Filobasidiella neoformans) Length = 197 Score = 59.7 bits (138), Expect = 2e-08 Identities = 35/82 (42%), Positives = 45/82 (54%) Frame = +3 Query: 6 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREV 185 S A R + G+ KG TT I RP+ KGL+T+ FVR ++REV Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142 Query: 186 VGHAQYEKRAMELLKVSKDKRA 251 G + YEKR MELL+ SKDK+A Sbjct: 143 AGFSPYEKRVMELLRNSKDKKA 164 Score = 35.5 bits (78), Expect = 0.42 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 340 K + + K+RLGT +R+KRK EELS V+ + R+ Sbjct: 160 KDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194 >UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schizosaccharomyces pombe|Rep: 60S ribosomal protein L36-A - Schizosaccharomyces pombe (Fission yeast) Length = 99 Score = 59.7 bits (138), Expect = 2e-08 Identities = 28/55 (50%), Positives = 39/55 (70%) Frame = +3 Query: 87 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRA 251 K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRA 67 >UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongyloides ratti|Rep: 60S ribosomal protein L36 - Strongyloides ratti Length = 91 Score = 54.0 bits (124), Expect = 1e-06 Identities = 38/91 (41%), Positives = 51/91 (56%) Frame = +3 Query: 33 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 212 +A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59 Query: 213 AMELLKVSKDKRALSS*SDDWAHTSAPRGSV 305 MELL V ++ L+S SAPR SV Sbjct: 60 MMELLLVI--RKLLNSQRPVLELISAPRRSV 88 >UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti (Yellowfever mosquito) Length = 86 Score = 52.0 bits (119), Expect = 5e-06 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Frame = +3 Query: 63 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 233 T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68 Query: 234 SKDKRAL 254 +DK AL Sbjct: 69 FQDKLAL 75 >UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A - Saccharomyces cerevisiae (Baker's yeast) Length = 100 Score = 50.0 bits (114), Expect = 2e-05 Identities = 31/79 (39%), Positives = 46/79 (58%) Frame = +3 Query: 15 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 194 M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50 Query: 195 AQYEKRAMELLKVSKDKRA 251 + YE+R ++L++ S +KRA Sbjct: 51 SPYERRLIDLIRNSGEKRA 69 Score = 31.9 bits (69), Expect = 5.2 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = +2 Query: 263 KRRLGTHIRAKRKREELSNVLAQMRK 340 K+RLG+ RAK K EE++N++A R+ Sbjct: 74 KKRLGSFTRAKAKVEEMNNIIAASRR 99 >UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal protein L36; n=1; Mus musculus|Rep: PREDICTED: similar to 60S ribosomal protein L36 - Mus musculus Length = 129 Score = 48.4 bits (110), Expect = 6e-05 Identities = 24/50 (48%), Positives = 34/50 (68%) Frame = +3 Query: 99 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 248 +K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+ Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119 >UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohymenophorea|Rep: 60S ribosomal protein L36 - Paramecium tetraurelia Length = 110 Score = 47.6 bits (108), Expect = 1e-04 Identities = 29/74 (39%), Positives = 42/74 (56%) Frame = +3 Query: 24 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 203 R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55 Query: 204 EKRAMELLKVSKDK 245 EKR +EL K ++ K Sbjct: 56 EKRIIELFKTNQPK 69 >UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L36 - Canis familiaris Length = 107 Score = 45.2 bits (102), Expect = 5e-04 Identities = 19/27 (70%), Positives = 25/27 (92%) Frame = +2 Query: 260 LKRRLGTHIRAKRKREELSNVLAQMRK 340 +K+R+GTH+RAKR+ EELSNVLA +RK Sbjct: 75 IKKRVGTHVRAKRETEELSNVLAAIRK 101 Score = 31.9 bits (69), Expect = 5.2 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +3 Query: 204 EKRAMELLKVSKDKRAL 254 ++RAMELLKVSKDKR L Sbjct: 56 QRRAMELLKVSKDKRTL 72 >UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1; Griffithsia japonica|Rep: Putative 60S ribosomal protein L36 - Griffithsia japonica (Red alga) Length = 94 Score = 45.2 bits (102), Expect = 5e-04 Identities = 20/38 (52%), Positives = 27/38 (71%) Frame = +3 Query: 141 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 254 Q+ + VR ++ EV G A YEKR +ELL++ KDKRAL Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRAL 65 Score = 40.3 bits (90), Expect = 0.015 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMR 337 K + +F K+RLGTH+RAKRKRE+++ L R Sbjct: 60 KDKRALKFAKKRLGTHLRAKRKREQMAEALRSKR 93 >UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypanosoma brucei|Rep: 60S ribosomal protein L36 - Trypanosoma brucei Length = 109 Score = 45.2 bits (102), Expect = 5e-04 Identities = 30/82 (36%), Positives = 42/82 (51%) Frame = +3 Query: 9 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 188 E PR I G KG+KTT+ A R D+ L K + V+ ++ ++V Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56 Query: 189 GHAQYEKRAMELLKVSKDKRAL 254 G + E+R ELL+V KDKRAL Sbjct: 57 GFSPMERRVQELLRVGKDKRAL 78 >UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens (Human) Length = 32 Score = 44.0 bits (99), Expect = 0.001 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSN 319 K + +F+K+R+GTHIRAKRKREELSN Sbjct: 5 KDKRALKFIKKRVGTHIRAKRKREELSN 32 >UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal protein L36; n=8; Eutheria|Rep: PREDICTED: similar to rat ribosomal protein L36 - Mus musculus Length = 105 Score = 43.2 bits (97), Expect = 0.002 Identities = 32/79 (40%), Positives = 42/79 (53%) Frame = +3 Query: 15 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 194 MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50 Query: 195 AQYEKRAMELLKVSKDKRA 251 Y+ + L KVS DK A Sbjct: 51 MSYDWCTVVLPKVSNDKCA 69 Score = 41.1 bits (92), Expect = 0.009 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +2 Query: 233 VKRQACS-EFLKRRLGTHIRAKRKREELSNVLAQMRK 340 V C+ +F+K+R+G HI KRK EELS V+A MRK Sbjct: 63 VSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99 >UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyostelium discoideum|Rep: 60S ribosomal protein L36 - Dictyostelium discoideum AX4 Length = 105 Score = 43.2 bits (97), Expect = 0.002 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = +3 Query: 132 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 254 K + TK +RD++RE+ G + YE+R ELLK DKRAL Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRAL 75 >UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1; Allium cepa|Rep: 60S ribosomal protein L36 homolog - Allium cepa (Onion) Length = 64 Score = 42.7 bits (96), Expect = 0.003 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = +2 Query: 266 RRLGTHIRAKRKREELSNVLAQMR 337 R+LGTH RAKRKREE+SNVL +MR Sbjct: 32 RKLGTHKRAKRKREEMSNVLRKMR 55 >UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium yoelii yoelii Length = 113 Score = 42.7 bits (96), Expect = 0.003 Identities = 27/71 (38%), Positives = 37/71 (52%) Frame = +3 Query: 21 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 200 P IAVG GH TK S +K I K++ K+ + D+VRE+ G + Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56 Query: 201 YEKRAMELLKV 233 YEKR +EL+KV Sbjct: 57 YEKRLIELIKV 67 Score = 33.5 bits (73), Expect = 1.7 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +2 Query: 254 EFLKRRLGTHIRAKRKREELSNVLAQMRK 340 ++ K++LGTH R K KREE+ ++ R+ Sbjct: 78 KYAKKKLGTHKRGKAKREEIQKIVMMQRR 106 >UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9; Trypanosomatidae|Rep: 60S ribosomal protein l36, putative - Leishmania major Length = 105 Score = 40.7 bits (91), Expect = 0.011 Identities = 26/78 (33%), Positives = 39/78 (50%) Frame = +3 Query: 21 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 200 PR I G KGH TT+ + + P + KH + V+ ++ ++VG + Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55 Query: 201 YEKRAMELLKVSKDKRAL 254 EKR E L+V K+KRAL Sbjct: 56 LEKRVQEFLRVGKEKRAL 73 >UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to rat ribosomal protein L36 - Bos taurus Length = 131 Score = 39.9 bits (89), Expect = 0.020 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 340 K + +F+++ LGTHI AKRK ELSNVLA R+ Sbjct: 71 KDKQALKFIQKMLGTHICAKRKARELSNVLATTRE 105 Score = 35.9 bits (79), Expect = 0.32 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Frame = +3 Query: 72 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 248 ++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+ Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74 Query: 249 AL 254 AL Sbjct: 75 AL 76 >UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia lamblia ATCC 50803|Rep: 60S ribosomal protein L36 - Giardia lamblia ATCC 50803 Length = 90 Score = 39.1 bits (87), Expect = 0.034 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = +3 Query: 150 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 254 H +FV+ +++E G A YE +ELL+++KD+ AL Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHAL 63 >UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2; Plasmodium|Rep: 60S Ribosomal protein L36, putative - Plasmodium falciparum (isolate 3D7) Length = 130 Score = 37.1 bits (82), Expect = 0.14 Identities = 13/30 (43%), Positives = 23/30 (76%) Frame = +3 Query: 144 TKHSKFVRDLVREVVGHAQYEKRAMELLKV 233 +K + ++D+VRE+ G + YEKR +EL+K+ Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKI 85 Score = 33.1 bits (72), Expect = 2.3 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = +2 Query: 254 EFLKRRLGTHIRAKRKREELSNVLAQMRK 340 ++ K++LGTH R K KREE+ V+ R+ Sbjct: 96 KYAKKKLGTHKRGKAKREEIQKVVILQRR 124 >UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba histolytica|Rep: 60S ribosomal protein L36 - Entamoeba histolytica Length = 103 Score = 36.7 bits (81), Expect = 0.18 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +3 Query: 144 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALS 257 TK V D++RE G YE+ M+LL+ DK+AL+ Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALN 62 >UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; Trichomonas vaginalis G3|Rep: Ribosomal protein L36e, putative - Trichomonas vaginalis G3 Length = 93 Score = 35.1 bits (77), Expect = 0.56 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +2 Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQ 331 +R+A +FLK+RLGTH RA +K L V+ + Sbjct: 54 RRRAARQFLKKRLGTHRRAMKKLNTLEEVVQE 85 >UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 208 Score = 34.7 bits (76), Expect = 0.74 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +3 Query: 15 MAPRFEIAVGLRKGHKTTK 71 MAP+ E+AVGL+KGHK TK Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173 >UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei|Rep: PTGT-4 protein - Trypanosoma brucei Length = 508 Score = 34.3 bits (75), Expect = 0.98 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -2 Query: 371 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRT 255 +G GD P + P SS + RC L SSWR I +RT Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPART 137 >UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1; Halorubrum lacusprofundi ATCC 49239|Rep: Molybdopterin oxidoreductase - Halorubrum lacusprofundi ATCC 49239 Length = 996 Score = 34.3 bits (75), Expect = 0.98 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Frame = +3 Query: 90 GITDKAIRIRPARLKGLQTKHSKFVRDLVREV--VGHAQYEKRAMELLKVSKDKRALSS* 263 G TD I R L L+ + S++ + V E+ VG ++K A E +V + K Sbjct: 405 GTTDGDIETRSVWLN-LRDELSEYTPERVNEITGVGRQTHQKIAREFAEVDRAKIIHGKG 463 Query: 264 SDDWAHTSAPRGSVKNLATCSLR*GRQ 344 +DW H S++ L T + GRQ Sbjct: 464 VNDWYHNDLGNRSIQLLVTLTGNLGRQ 490 >UniRef50_A1D3E0 Cluster: Putative uncharacterized protein; n=1; Neosartorya fischeri NRRL 181|Rep: Putative uncharacterized protein - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)) Length = 402 Score = 31.5 bits (68), Expect = 6.9 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Frame = +3 Query: 90 GITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSK----DKRALS 257 G+TD+ I RP R +Q H K V + +R VG A + + + K D + + Sbjct: 278 GVTDEEIATRPRRYLNIQMSHEK-VHEALRPFVGGAYTDDNGNIMRQADKKLLGDGKTVK 336 Query: 258 S*SDDWAHTSAPR 296 + W TS R Sbjct: 337 KTATSWNDTSGIR 349 >UniRef50_Q10209 Cluster: Uncharacterized J domain-containing protein C4H3.01; n=1; Schizosaccharomyces pombe|Rep: Uncharacterized J domain-containing protein C4H3.01 - Schizosaccharomyces pombe (Fission yeast) Length = 392 Score = 31.5 bits (68), Expect = 6.9 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 230 GVKRQACSEFLKRRLGTHIRAKR 298 GV R+ACS LK+R+ T +R KR Sbjct: 322 GVLREACSNLLKKRVPTELRLKR 344 >UniRef50_Q4RYN6 Cluster: Chromosome 16 SCAF14974, whole genome shotgun sequence; n=5; Clupeocephala|Rep: Chromosome 16 SCAF14974, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 551 Score = 31.1 bits (67), Expect = 9.1 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = +3 Query: 102 KAIRIRPARLKGLQ---TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALSS*SDD 272 +A+ R +L LQ T+ + +R+ + +QY+ +EL+ + + + + Sbjct: 19 RAVEFRLQQLHALQKMVTEKEADISSALRQDINRSQYDTPLLELISIENEIKLAIEKLSE 78 Query: 273 WAHTSAPRGSVKNLATCS 326 WA APR +NL T S Sbjct: 79 WA---APRPVERNLLTIS 93 >UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 197N|Rep: Phage protein - Bordetella avium (strain 197N) Length = 416 Score = 31.1 bits (67), Expect = 9.1 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 108 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 200 +R ARL G+QTKH+K D V+ AQ Sbjct: 286 LRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 355,611,077 Number of Sequences: 1657284 Number of extensions: 6104775 Number of successful extensions: 14892 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 14688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14883 length of database: 575,637,011 effective HSP length: 92 effective length of database: 423,166,883 effective search space used: 18619342852 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -