Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30343
(506 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 99 5e-20
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 89 5e-17
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 89 7e-17
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 84 2e-15
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 83 4e-15
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 83 5e-15
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 78 1e-13
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 71 2e-11
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 69 6e-11
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 67 2e-10
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 66 3e-10
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 62 9e-09
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 60 3e-08
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 54 1e-06
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 54 2e-06
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 53 4e-06
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 48 2e-04
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 44 0.002
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 40 0.024
UniRef50_A7Q0D9 Cluster: Chromosome chr7 scaffold_42, whole geno... 40 0.043
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 39 0.075
UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1; Ostreoco... 38 0.17
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 36 0.70
UniRef50_Q3W1D8 Cluster: Catalytic domain of components of vario... 34 1.6
UniRef50_A6S915 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 2.8
UniRef50_A7SGP5 Cluster: Predicted protein; n=2; Nematostella ve... 33 3.7
UniRef50_Q140Y0 Cluster: Hypothetical exported protein; n=3; Bur... 33 4.9
UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase, cyto... 32 6.5
UniRef50_Q1X873 Cluster: Fanconi anemia B; n=3; Danio rerio|Rep:... 32 8.6
UniRef50_O29628 Cluster: Iron-sulfur cluster binding protein; n=... 32 8.6
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 32 8.6
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 99.1 bits (236), Expect = 5e-20
Identities = 39/59 (66%), Positives = 52/59 (88%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
+HQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
Score = 92.3 bits (219), Expect = 6e-18
Identities = 49/98 (50%), Positives = 60/98 (61%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ E AKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
+AL + + ++ K L + ++ R K+
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 103
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 89.0 bits (211), Expect = 5e-17
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +2
Query: 257 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 427
H I L+ V + K LGEWAGLCKID +G ARK+VGCSC+VIKDFGEET AL+++K +L
Sbjct: 85 HSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHL 141
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/59 (52%), Positives = 46/59 (77%)
Frame = +3
Query: 75 NMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
+MDV+ AL+ ++ + +GG+V GLHE+AK ++KR A LCVLAE+C++ Y KLV+ALC
Sbjct: 24 DMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALC 82
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 88.6 bits (210), Expect = 7e-17
Identities = 36/64 (56%), Positives = 50/64 (78%)
Frame = +2
Query: 239 SGSVQQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 418
+G ++ PL++VD+NK LGEW+GLCK D +G+ARK+VGCSCVV+K FG++T LD L
Sbjct: 68 TGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVKHFGDDTQELDTLL 127
Query: 419 DYLK 430
+ LK
Sbjct: 128 EILK 131
Score = 76.6 bits (180), Expect = 3e-13
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLA 203
M+DVE V G + ++ L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA
Sbjct: 1 MSDVEDAVEV-----GEHGEMYNLLKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLA 55
Query: 204 ENCDEAAYKKLVQALC 251
NC+EA YKKLV LC
Sbjct: 56 NNCEEAMYKKLVTGLC 71
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 83.8 bits (198), Expect = 2e-15
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLA 203
+A EVEVP +G M V AL+ VL+ ALIH GL GL E AKALD+RQA +CVL
Sbjct: 13 VAAEEVEVPAESG-AGGQMSVLDALKGVLRIALIHDGLARGLREAAKALDRRQAHMCVLN 71
Query: 204 ENCDEAAYKKLVQALCN 254
E C+E AYKKLV ALC+
Sbjct: 72 EGCEEEAYKKLVVALCS 88
Score = 49.6 bits (113), Expect(2) = 8e-11
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2
Query: 320 KIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
++D++G ARK+V CSCVV+KD+GEE+ VL +Y +
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEESQERSVLLNYFQ 180
Score = 39.1 bits (87), Expect(2) = 8e-11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLC 319
+H+IPL+KV + K LGEW GLC
Sbjct: 89 EHKIPLIKVPDGKMLGEWVGLC 110
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 83.0 bits (196), Expect = 4e-15
Identities = 42/90 (46%), Positives = 56/90 (62%)
Frame = +3
Query: 30 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAEN 209
+ +E P P+L G MD+ ALQ V+K + H GLV GL E AKA++K A LCVLAE+
Sbjct: 4 ETPIETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 210 CDEAAYKKLVQALCNNIRFHWSRLTTTKSL 299
CD+ Y KLV+ALC H + + K+L
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTL 92
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 18/77 (23%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGL------------------CKIDKDGKARKIVGCSCVVIK 379
+H + LV V + K LGEWAGL CKID +GKARK+VGCSCVV+K
Sbjct: 78 EHNVHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSEGKARKVVGCSCVVVK 137
Query: 380 DFGEETPALDVLKDYLK 430
D+GEE+ L++++DY+K
Sbjct: 138 DYGEESEGLNIVQDYVK 154
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 82.6 bits (195), Expect = 5e-15
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 415
+H IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+V+ D GEE+ L L
Sbjct: 65 EHGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVTDIGEESYGLKYL 118
Score = 64.9 bits (151), Expect = 1e-09
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +3
Query: 78 MDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALCN 254
MD++ A+Q+VLK A+ G+ GL++ K +++R VLC LA+NC+E AY L++ALCN
Sbjct: 6 MDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALCN 64
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 78.2 bits (184), Expect = 1e-13
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 427
+H IPL++V +NK LGEWAGLCK+DKD ARK+V CS +VIK FG+E+ L +Y+
Sbjct: 76 EHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKESDDYKFLMEYI 133
Score = 72.1 bits (169), Expect = 7e-12
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +3
Query: 57 PILSGN----NMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAA 224
P+++ N N D VALQ+V+K +L G+ GLHET KALDKR A LCVLA NCDE
Sbjct: 6 PVIAANPLEKNTDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPN 65
Query: 225 YKKLVQALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSK 380
+ +LV+AL + K+L +L + K+ A L K
Sbjct: 66 FVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIK 117
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 70.9 bits (166), Expect = 2e-11
Identities = 29/57 (50%), Positives = 46/57 (80%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDY 424
++++PL+KV + K+LGEWAGL KID++G ARK+VG S VV+K++G ET L ++ ++
Sbjct: 83 ENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASVVVVKNWGAETDELSMIMEH 139
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +3
Query: 24 MADVE--VEVPTNPILSGN-NMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLC 194
M+DVE VEV ++ + + AL+ VL+TAL+H GL GL E+ KAL + +A+L
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 195 VLAENCDEAAYKKLVQALCNN 257
VL + EA KLV+ L N+
Sbjct: 61 VLVSSVTEANIIKLVEGLAND 81
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 68.9 bits (161), Expect = 6e-11
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNM--DVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCV 197
M+DVE++ + + D+ A++ VLK + + GGL+ GL+E ALD ++A +C
Sbjct: 1 MSDVEIDQEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCF 60
Query: 198 LAENCDEAAYKKLVQALC 251
LAE+C+E YK+LV+ALC
Sbjct: 61 LAESCEEDCYKQLVEALC 78
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/59 (44%), Positives = 42/59 (71%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYL 427
++ IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I D+G E+ A L+ ++
Sbjct: 79 RERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAIVDYGVESEAYHYLQKHI 137
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/53 (62%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = +3
Query: 21 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDK 176
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+ KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 66.5 bits (155), Expect = 3e-10
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
+Q+ I LV +D +KL +WAGL ++ DG RK + CSC+ ++DFGE T ALD L L+
Sbjct: 85 KQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKALDYLLSQLQ 144
Score = 58.8 bits (136), Expect = 7e-08
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALC--NNIRF 266
AL+ VL A GL+ GL E +ALD+R A LCVLA++C++ YKKLV AL NNI
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNI-- 89
Query: 267 HWSRLTTTKSLENGLVSARLTRMARQGKL 353
L + E A LTRMA G +
Sbjct: 90 ---DLVSMDEREKLAQWAGLTRMAADGSV 115
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 61.7 bits (143), Expect = 9e-09
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
+HQI L+K D+ + L EW + D++GK+ K+V C+ VV+K +G+E+ A D +K+Y K
Sbjct: 71 EHQISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYGKESQAKDDIKEYFK 129
Score = 33.9 bits (74), Expect = 2.1
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLV 239
+L + +D+N L +VL A H G + TAK + NC+E Y KLV
Sbjct: 6 LLGESKIDINTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLSFPVNCNEPMYVKLV 65
Query: 240 QALC 251
+A C
Sbjct: 66 KAHC 69
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNV-ALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVL 200
M+DVE N ++ + NV A+Q+V+K A +H GL G+ E K+++ ++A +C L
Sbjct: 1 MSDVE-SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFL 59
Query: 201 AENCDEAAYKKLVQALC 251
++ C E AYKKL+ LC
Sbjct: 60 SDVCSEPAYKKLITTLC 76
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 254 QHQIPLVKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVL 415
+ IPL V N+ K LG WAGL K+D +G ARKI+G S V + DFGE++ D L
Sbjct: 78 EKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVVDFGEDSAEKDFL 132
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 63 LSGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQ 242
++ N +N L +V+K++ + GLHE + ++ +QA+ +AE+CD+ Y KLV+
Sbjct: 1 MADQNQQLNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVK 60
Query: 243 ALC--NNIRF 266
ALC N I++
Sbjct: 61 ALCAKNEIKY 70
Score = 32.7 bits (71), Expect = 4.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 394
+++I V V LGE+ G + G+ +K+ GCS + I+ + E
Sbjct: 65 KNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIRKYAPE 111
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 53.6 bits (123), Expect = 2e-06
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 251 QQHQIPLVKVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVVI-KDFGEETPALDVLKDY 424
++H +P ++ + +++K+GEWAGLCK D +G ARKIVG + V I +F E++ + + +
Sbjct: 103 KEHGVPCIETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFDEKSESAEEMISL 162
Query: 425 LK 430
+K
Sbjct: 163 IK 164
Score = 50.0 bits (114), Expect = 3e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALC 102
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIR 263
L+ V++T+L G L G+HE KA++ +QA VLA++C E YKKL+ AL +
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVALAKQFQ 69
Score = 38.3 bits (85), Expect = 0.099
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 394
+Q QIP+ KV+ LGEW G+ K K K CS V +K F E
Sbjct: 66 KQFQIPVWKVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALKHFAIE 113
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWS 275
L+E K GLV G + K L++++A +C LA +C+E Y +V+ LC + H
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 276 RLTTTKSL 299
+ T ++L
Sbjct: 70 KKFTRRTL 77
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 153 ETAKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFH-WSRLTTTKSLENGLV-SARL 326
++AKA++ +QA VLA++C E YKKLV AL + W LENGL + L
Sbjct: 52 KSAKAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVEKGVLYLENGLAFQSSL 111
Query: 327 TRMARQGKLSA 359
R R + +A
Sbjct: 112 LRQRRSNQENA 122
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 40.3 bits (90), Expect = 0.024
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
++ +L A L G+ + K ++ ++A+ C +AE+CD Y L++A+C
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAIC 77
Score = 38.7 bits (86), Expect = 0.075
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVI 376
++ + +V V +LGEW CKI +DG A +I CSC ++
Sbjct: 78 KEQGVKIVMVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_A7Q0D9 Cluster: Chromosome chr7 scaffold_42, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_42, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 253
Score = 39.5 bits (88), Expect = 0.043
Identities = 25/61 (40%), Positives = 27/61 (44%)
Frame = -2
Query: 211 QFSAKTHSTACLLSRALAVS*RPCTRPPWIKAVFSTSCSATFTSMLLPDKMGLVGTSTST 32
Q SA T S A S ALA S RP T PP TSC A S + P T T +
Sbjct: 53 QSSANTQSWAACFSIALAPSWRPRTSPPLANDFLRTSCKAVMRSKVSPGGAPAASTITDS 112
Query: 31 S 29
S
Sbjct: 113 S 113
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 38.7 bits (86), Expect = 0.075
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 78 MDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALC 251
M + L+ ++K A +V G+ ET K + + C+LA+NC++ YK ++ LC
Sbjct: 1 MIIEKFLKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLC 58
>UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 473
Score = 37.5 bits (83), Expect = 0.17
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -2
Query: 442 LARRLEVVLEHIQRWSFLAEIFDDNTGAADNFPCLAILVNLAETSPFSK 296
+AR L+ VL+H +R FL E+ D + A N A V LA+TSP ++
Sbjct: 295 VARVLQEVLKHAERRGFLTEVADHDARALHNLTRGAFGVELAQTSPLTE 343
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 35.5 bits (78), Expect = 0.70
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 135 LVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALCNNI 260
L+HG++E KA++++QA L V+A + + + ALC +
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKKL 176
>UniRef50_Q3W1D8 Cluster: Catalytic domain of components of various
dehydrogenase complexes; n=4; Actinomycetales|Rep:
Catalytic domain of components of various dehydrogenase
complexes - Frankia sp. EAN1pec
Length = 294
Score = 34.3 bits (75), Expect = 1.6
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 81 DVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALCNNI 260
D N AL+ L+T + H VHG K LD R+ VL + N E + +QA +
Sbjct: 110 DANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAE-IQAHLERV 168
Query: 261 R 263
R
Sbjct: 169 R 169
>UniRef50_A6S915 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 41
Score = 33.5 bits (73), Expect = 2.8
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 147 LHETAKALDKRQAVLCVLAENCDEAAYKK 233
+HET LDK++ VL VL CDEA +++
Sbjct: 1 MHETFDDLDKQRKVLFVLGRICDEAGFRR 29
>UniRef50_A7SGP5 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 2408
Score = 33.1 bits (72), Expect = 3.7
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHETAKA---LDKRQAVLC--VLAENCDEAAYKKLVQ-A 245
V++ + T L+HGG+V ET K QA++C ++A DE + +V
Sbjct: 241 VSLLKSQKATTELLHGGIVIVAMETMKTKQDCGNLQAIICSLLVALANDELGQRVIVDLG 300
Query: 246 LCNNIRFHWSRLTTTKSLE-NGLVS-ARLTRMARQGKLSAAPVLSSKISARKLQRWM 410
+CN IR R ++ GL + A L+ M + + + +++ K++ + L WM
Sbjct: 301 VCNEIRTVLRRHRNHADIQKRGLEAFALLSPMMIKSQDISMCLVNGKLTGQSLDHWM 357
>UniRef50_Q140Y0 Cluster: Hypothetical exported protein; n=3;
Burkholderia|Rep: Hypothetical exported protein -
Burkholderia xenovorans (strain LB400)
Length = 157
Score = 32.7 bits (71), Expect = 4.9
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = +3
Query: 123 IHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWSRLTTTKSLE 302
+ G L + + LD+ + + + AA + L A +IR L +T +
Sbjct: 36 VAGKLNNAAQVAGQKLDQAASYIGQQVDATKSAAQQNLESASAPSIRIDPGALASTA--Q 93
Query: 303 NGLVSARLTRMARQGKLSAAPVLSSKISARKLQRWMCSRTTSSRRAN 443
L SA A+ GK ++ S + + RKLQ W + SS A+
Sbjct: 94 ANLQSAASATNAQLGKAASLTGQSLESAGRKLQEWSAQSSASSANAS 140
>UniRef50_A5C1P4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 545
Score = 32.3 bits (70), Expect = 6.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 132 GLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWS 275
G+V GLH +++ QA L V+A+ D + + LC I ++
Sbjct: 290 GVVDGLHHITYYIEQNQAQLAVIAQEVDPIEFAVWLSVLCQKIEVFYA 337
>UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase,
cytoplasmic; n=2; Arabidopsis thaliana|Rep: Probable
threonyl-tRNA synthetase, cytoplasmic - Arabidopsis
thaliana (Mouse-ear cress)
Length = 458
Score = 32.3 bits (70), Expect = 6.5
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 168 LDKRQAVLCVLAENCDEAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSAR 323
L RQA++C L+E+C ++Y K VQ N + ++ + +SL + AR
Sbjct: 355 LSPRQAIVCSLSEDC--SSYAKQVQKQINEVGYYVDIDESDRSLRKKVADAR 404
>UniRef50_Q1X873 Cluster: Fanconi anemia B; n=3; Danio rerio|Rep:
Fanconi anemia B - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 807
Score = 31.9 bits (69), Expect = 8.6
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +3
Query: 165 ALD--KRQAVLCVLAENCDE--AAYKKLVQALCNNIRFH 269
ALD KRQ V CVL C + +A+K ++ ++CN+++ H
Sbjct: 71 ALDQQKRQKVPCVLLRLCKKRASAFKYMLYSICNDLKLH 109
>UniRef50_O29628 Cluster: Iron-sulfur cluster binding protein; n=1;
Archaeoglobus fulgidus|Rep: Iron-sulfur cluster binding
protein - Archaeoglobus fulgidus
Length = 340
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 66 SGNNMDVNVALQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDE 218
SG + + A++ ++K GLVH T K +D+R V C E+C E
Sbjct: 206 SGREITADEAIEIIMKAE--EDGLVHTWPNTGKIVDRRVTVNCNCCEDCCE 254
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 31.9 bits (69), Expect = 8.6
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHETAKALDKRQAVLCVLAENCDEAAYKKL 236
++ ++KT L GG G T K+L +A ++A NC E +K+
Sbjct: 4 VETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCPEEVLEKI 50
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,291,774
Number of Sequences: 1657284
Number of extensions: 9143590
Number of successful extensions: 27910
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27904
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -