Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30342
(616 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 139 3e-34
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 139 3e-34
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 114 8e-27
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 91 1e-19
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 81 2e-16
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 45 1e-05
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 40 2e-04
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 30 0.23
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.2
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 26 3.8
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.8
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 5.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 139 bits (337), Expect = 3e-34
Identities = 74/120 (61%), Positives = 79/120 (65%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVMT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+
Sbjct: 401 IETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELS 460
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFD+DANGIL K KEEI+RMV+EA
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEA 520
Score = 90.2 bits (214), Expect = 2e-19
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
EK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINP+E
Sbjct: 316 EKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQA 375
Query: 181 XILHGDKSEEVQD 219
IL GD SE+ QD
Sbjct: 376 AILVGDTSEKTQD 388
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 139 bits (337), Expect = 3e-34
Identities = 75/120 (62%), Positives = 78/120 (65%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVMT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+
Sbjct: 401 IETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELS 460
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFD+DANGIL K KEEI+RMV EA
Sbjct: 461 GIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEA 520
Score = 90.6 bits (215), Expect = 2e-19
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
E+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINP+E
Sbjct: 316 ERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQA 375
Query: 181 XILHGDKSEEVQD 219
+L GD SE+ QD
Sbjct: 376 AVLTGDTSEKTQD 388
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 114 bits (275), Expect = 8e-27
Identities = 64/121 (52%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGVMT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L
Sbjct: 430 IETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLR 489
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKF-XXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNE 611
GIPPAPRGVPQIE TF++DANG+L K +E+IERMV E
Sbjct: 490 GIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKE 549
Query: 612 A 614
A
Sbjct: 550 A 550
Score = 68.9 bits (161), Expect = 5e-13
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
E+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INP+E
Sbjct: 348 EQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQA 406
Query: 181 XILHGDKSEE 210
+L G++ +
Sbjct: 407 GVLSGEEGSD 416
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 91.1 bits (216), Expect = 1e-19
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGV T LI RN +D Q V I+VF+GER + +DN L+G F+LT
Sbjct: 444 IETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLT 503
Query: 435 GIPPAPRGVPQIEDTFDIDANGIL 506
GI PAP+G PQIE +FD+DA+GI+
Sbjct: 504 GIAPAPKGQPQIEVSFDVDADGII 527
Score = 48.4 bits (110), Expect = 8e-07
Identities = 21/65 (32%), Positives = 41/65 (63%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
+++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NP+E
Sbjct: 364 KRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQG 422
Query: 181 XILHG 195
+L G
Sbjct: 423 GVLSG 427
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 509 VSAIEKSTNKENKITITNDKG 571
VSA +K+TNK++ IT+ G
Sbjct: 529 VSARDKATNKDSSITVAGSSG 549
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 80.6 bits (190), Expect = 2e-16
Identities = 35/49 (71%), Positives = 44/49 (89%)
Frame = +1
Query: 4 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINP+E
Sbjct: 321 KVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDE 369
Score = 72.5 bits (170), Expect = 4e-14
Identities = 35/81 (43%), Positives = 46/81 (56%)
Frame = +3
Query: 267 GGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 446
G V + RN +DNQ V V++GER +N LG+F+LTGIPP
Sbjct: 410 GNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPP 469
Query: 447 APRGVPQIEDTFDIDANGILK 509
PRG ++E TF++DANGILK
Sbjct: 470 MPRGQAELEATFELDANGILK 490
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 506 QVSAIEKSTNKENKITITNDKGRLS 580
+V+A+EK+T + I ITN G LS
Sbjct: 490 KVTAVEKTTGRSAHIEITNSVGHLS 514
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 44.8 bits (101), Expect = 1e-05
Identities = 17/49 (34%), Positives = 35/49 (71%)
Frame = +1
Query: 4 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N +E
Sbjct: 353 KALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/50 (38%), Positives = 35/50 (70%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N +E
Sbjct: 324 EKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 30.3 bits (65), Expect = 0.23
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 4 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 135
+++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 343 EAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.9 bits (59), Expect = 1.2
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -2
Query: 231 KQQQILHLLR-LVTVQDSSLDSCTISYG-LFRVNRFV--ELLSIKEILQELLHLGDTSGA 64
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 63 THQYNIVDLSLIHLGIT 13
+ I D SL+ L T
Sbjct: 992 NLETTIEDTSLVKLETT 1008
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/67 (23%), Positives = 26/67 (38%)
Frame = -3
Query: 443 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSS 264
WD G+ ++ I GHS +L L+ +G V+ S+ H
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLE--NGSVLTANYNSASISRSKAKDEKPHVWHHEGK 118
Query: 263 SLNPRER 243
SL+P +
Sbjct: 119 SLHPERQ 125
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 298 TLPSPLNRLRHSPPTLITNPEYSSKYLR 381
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 433 PGSHR-RRVACLKLRIPSTSMPTVSSSFRYRE 525
PG+ + R AC+K + + S+P+ S S YR+
Sbjct: 30 PGTSKLHRAACIKRKSINLSLPSNSYSLSYRQ 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,409,177
Number of Sequences: 5004
Number of extensions: 44841
Number of successful extensions: 168
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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