Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30342
(616 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 143 1e-34
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 129 2e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 116 2e-26
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 60 1e-09
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 58 7e-09
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 29 4.0
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022) 28 6.9
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 6.9
SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 143 bits (346), Expect = 1e-34
Identities = 76/120 (63%), Positives = 79/120 (65%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVM+ LIKRN YSDNQPGVLIQVFEGER+MT NNLLGKFELT
Sbjct: 405 IETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELT 464
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFDIDANGIL K KE+IERMVNEA
Sbjct: 465 GIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVNEA 524
Score = 91.9 bits (218), Expect = 4e-19
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 EKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXX 174
E+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINP+E
Sbjct: 318 EQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAV 377
Query: 175 XXXILHGDKSEEVQD 219
ILHGDK + V+D
Sbjct: 378 QAAILHGDKDDTVKD 392
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 2e-31
Identities = 68/120 (56%), Positives = 77/120 (64%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
+ETAGGVMT IKRN YSDNQ VLIQV+EGER++TKDNNLLGKFEL+
Sbjct: 497 LETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLGKFELS 556
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQI+ TFD+D+NGIL K KE+IERMV EA
Sbjct: 557 GIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVKEA 616
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 EKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXX 177
EK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINP+E
Sbjct: 411 EKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQ 470
Query: 178 XXILHGDKSEEVQD 219
ILHGDKSE QD
Sbjct: 471 AAILHGDKSEATQD 484
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 129 bits (312), Expect = 2e-30
Identities = 68/120 (56%), Positives = 76/120 (63%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAG VMT LI+RN YSDNQP V I+VFEGER +TK NNLLGKF+L+
Sbjct: 404 IETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLGKFDLS 463
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFDIDANGIL K KEEI+RM+N+A
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEIDRMINDA 523
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +1
Query: 4 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXXX 183
K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINP+E
Sbjct: 320 KALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAA 379
Query: 184 ILHGDKSEEVQD 219
IL GDKS+EV+D
Sbjct: 380 ILSGDKSDEVKD 391
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 116 bits (278), Expect = 2e-26
Identities = 63/120 (52%), Positives = 71/120 (59%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGVMT LI RN +DNQ V IQVFEGER MTKDN+ LGKF+L
Sbjct: 1098 IETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLGKFDLN 1157
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TF+ID NGIL+ + E+IERMVN+A
Sbjct: 1158 GIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDIERMVNDA 1217
Score = 74.9 bits (176), Expect = 5e-14
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INP+E
Sbjct: 1015 QKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQA 1074
Query: 181 XILHGDK 201
+L G++
Sbjct: 1075 GVLGGEE 1081
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 99.1 bits (236), Expect = 2e-21
Identities = 56/120 (46%), Positives = 66/120 (55%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGV T LI RN +D Q V I+VF+GER M DN LLG+F+L
Sbjct: 209 IETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQLV 268
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQ+E TFDIDANGI+ +S K+ IE M+ EA
Sbjct: 269 GIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVIQSSGGLS-KDAIENMIKEA 327
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
+K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NP+E
Sbjct: 129 KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQG 187
Query: 181 XILHGD 198
+L GD
Sbjct: 188 GVLAGD 193
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
+K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NP+E
Sbjct: 74 KKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQG 132
Query: 181 XILHGD 198
+L GD
Sbjct: 133 GVLAGD 138
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 431
IET GGV T LI RN +D Q V I+VF+GER M DN LLG+F+L
Sbjct: 154 IETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 57.6 bits (133), Expect = 7e-09
Identities = 22/46 (47%), Positives = 38/46 (82%)
Frame = +1
Query: 10 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPE 147
L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+PE
Sbjct: 354 LAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = +1
Query: 25 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXXXILHGDKS 204
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+P+E IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94
Query: 205 EEV 213
++
Sbjct: 95 ADM 97
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 4 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
++L+ A M I +VLVGG R+PKVQ L EL K+IN +E
Sbjct: 303 RALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = +1
Query: 37 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
+I + +VGGSTRIP ++ ++++ F GKEL ++N +E
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2
Query: 249 GKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLFRVNRFVELLSIKEIL 100
G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++
Sbjct: 11 GAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 451 GAGGIPVSSNLPSKLLSLVIARSPSNTWM 365
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -3
Query: 512 KLEDTVGIDVEGILNLRHATRRRWDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGG 333
+ ED VGID EG L++R R Q + T + TLK L + ++ G
Sbjct: 400 RYEDDVGIDDEGNLHIRSVGRFNEGTYQCKATRLAGASSTAAFTLKILALNTPTILSAKG 459
Query: 332 ECLSLFSGDGSVTL 291
+ S D VT+
Sbjct: 460 KA-SFGPRDADVTI 472
>SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022)
Length = 284
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 434 GQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS 261
GQL T VI+G T + DEY ++ + C G+ S D+ HDT S
Sbjct: 224 GQLSTTINPVIYGVMNKTFR--DEYKRMLCSLSCWCGCGRRGEASFESDDSQHDTRLS 279
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 301 LPSPLNRLRHSPPTLITNP 357
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +3
Query: 372 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEDTFDIDANGIL 506
+FE ++ + + + G EL PPA V ++E +F+ +G++
Sbjct: 125 IFEPRESVPRQSQVPGAMELLPPPPAVFNVNEVETSFEELKSGLM 169
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,681,365
Number of Sequences: 59808
Number of extensions: 370830
Number of successful extensions: 1071
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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