BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30342
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 147 6e-36
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 147 6e-36
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 129 2e-30
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 127 5e-30
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 127 5e-30
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 118 3e-27
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 116 1e-26
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 101 3e-22
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 101 3e-22
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 99 1e-21
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 56 3e-08
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 55 4e-08
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 44 1e-04
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical pr... 29 3.5
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 147 bits (356), Expect = 6e-36
Identities = 77/120 (64%), Positives = 81/120 (67%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+
Sbjct: 404 IETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELS 463
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFDIDANGIL K K++IERMVNEA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEA 523
Score = 110 bits (265), Expect = 7e-25
Identities = 54/73 (73%), Positives = 58/73 (79%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
EKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINP+E
Sbjct: 319 EKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQA 378
Query: 181 XILHGDKSEEVQD 219
IL GDKSE VQD
Sbjct: 379 AILSGDKSEAVQD 391
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 147 bits (356), Expect = 6e-36
Identities = 77/120 (64%), Positives = 81/120 (67%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+
Sbjct: 404 IETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELS 463
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFDIDANGIL K K++IERMVNEA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDKDRFSKDDIERMVNEA 523
Score = 110 bits (265), Expect = 7e-25
Identities = 54/73 (73%), Positives = 58/73 (79%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
EKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINP+E
Sbjct: 319 EKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQA 378
Query: 181 XILHGDKSEEVQD 219
IL GDKSE VQD
Sbjct: 379 AILSGDKSEAVQD 391
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 129 bits (311), Expect = 2e-30
Identities = 67/120 (55%), Positives = 76/120 (63%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FELT
Sbjct: 404 IETAGGVMTNLIDRNTRIPAKASKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELT 463
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQ++ TFDIDANGIL K + +I+RMVNEA
Sbjct: 464 GIPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGRLSQADIDRMVNEA 523
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
EK+LRDAK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINP+E
Sbjct: 319 EKALRDAKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQA 378
Query: 181 XILHGDKSEEVQD 219
+L G K + ++D
Sbjct: 379 AVLSGVKDDTIKD 391
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 127 bits (307), Expect = 5e-30
Identities = 67/120 (55%), Positives = 76/120 (63%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+
Sbjct: 404 IETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELS 463
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFDIDANGIL K + +I+RMV+EA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEA 523
Score = 94.7 bits (225), Expect = 5e-20
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
EK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINP+E
Sbjct: 319 EKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQA 378
Query: 181 XILHGDKSEEVQD 219
+L G K E ++D
Sbjct: 379 AVLSGVKDETIKD 391
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 127 bits (307), Expect = 5e-30
Identities = 67/120 (55%), Positives = 76/120 (63%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IETAGGVMT LI RN Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+
Sbjct: 404 IETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELS 463
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TFDIDANGIL K + +I+RMV+EA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEA 523
Score = 94.7 bits (225), Expect = 5e-20
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
EK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINP+E
Sbjct: 319 EKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQA 378
Query: 181 XILHGDKSEEVQD 219
+L G K E ++D
Sbjct: 379 AVLSGVKDETIKD 391
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 118 bits (285), Expect = 3e-27
Identities = 63/120 (52%), Positives = 72/120 (60%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+LT
Sbjct: 431 IETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLT 490
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
G+PPAPRGVPQIE TF+ID NGIL + E+IERM+N+A
Sbjct: 491 GLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDA 550
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INP+E
Sbjct: 348 QKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQG 407
Query: 181 XILHGDK 201
++ G++
Sbjct: 408 GVISGEE 414
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 116 bits (279), Expect = 1e-26
Identities = 62/120 (51%), Positives = 71/120 (59%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGVMT LI RN +DNQP V IQVFEGER MTKDN+ LGKF+LT
Sbjct: 431 IETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLT 490
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
G+PPAPRGVPQIE TF+ID NGIL + E+IE M+N+A
Sbjct: 491 GLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIEAMINDA 550
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXX 180
+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INP+E
Sbjct: 348 QKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQG 407
Query: 181 XILHGDK 201
++ G++
Sbjct: 408 GVISGEE 414
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 101 bits (243), Expect = 3e-22
Identities = 55/120 (45%), Positives = 66/120 (55%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++T
Sbjct: 59 IETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVT 118
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TF+ID NGIL E+IERM+N+A
Sbjct: 119 GIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDA 178
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +1
Query: 76 IPKVQKLLQDFFNGKELNKSINPEE 150
IPKVQ+L++D+FNGKE ++ INP+E
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDE 25
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 101 bits (243), Expect = 3e-22
Identities = 55/120 (45%), Positives = 66/120 (55%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GGVMT LI RN +D+Q V I ++EGER M DN+ LG F++T
Sbjct: 428 IETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVT 487
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQIE TF+ID NGIL E+IERM+N+A
Sbjct: 488 GIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDA 547
Score = 74.9 bits (176), Expect = 4e-14
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
+K L DA M K +H+IVLVGGSTRIPKVQ+L++D+FNGKE ++ INP+E
Sbjct: 345 QKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDE 394
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 99 bits (238), Expect = 1e-21
Identities = 55/120 (45%), Positives = 66/120 (55%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GG+MT LI RN +D Q V I+VF+GER M N LLG+F L
Sbjct: 426 IETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLV 485
Query: 435 GIPPAPRGVPQIEDTFDIDANGILKFXXXXXXXXXXXXXXXXXXKVVSPKEEIERMVNEA 614
GIPPAPRGVPQ+E TFDIDANGI+ +S K++IE M+ EA
Sbjct: 486 GIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLS-KDQIENMIKEA 544
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1
Query: 4 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXXX 183
K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NP+E
Sbjct: 347 KALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGA 405
Query: 184 ILHGDKSE 207
+L GD ++
Sbjct: 406 VLAGDVTD 413
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = +3
Query: 255 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 434
IET GG+MT LI RN +D Q V I+VF+GER M N LLG+F L
Sbjct: 426 IETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLV 485
Query: 435 GI 440
GI
Sbjct: 486 GI 487
Score = 54.0 bits (124), Expect = 8e-08
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +1
Query: 10 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEEXXXXXXXXXXXIL 189
L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NP+E +L
Sbjct: 349 LHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVL 407
Query: 190 HGDKSE 207
GD ++
Sbjct: 408 AGDVTD 413
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPEEXXXXXXXXX 177
E+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+P+E
Sbjct: 315 ERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIM 374
Query: 178 XXILHGDKSEEVQD 219
+L G +EEVQD
Sbjct: 375 AAVLSG--AEEVQD 386
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +3
Query: 276 MTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPR 455
M+ LIK+ D Q + + V+EGER + N LG+ L I P R
Sbjct: 406 MSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRR 464
Query: 456 GVPQIEDTFDIDANGILK 509
G ++ T ++D NGIL+
Sbjct: 465 GESVVDITLEVDYNGILQ 482
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPEEXXXXXXXXX 177
E+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+P+E
Sbjct: 315 ERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIM 374
Query: 178 XXILHGDKSEEVQD 219
+L G +EEVQD
Sbjct: 375 AAVLSG--AEEVQD 386
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +3
Query: 276 MTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPR 455
M+ LIK+ D Q + + V+EGER + N LG+ L I P R
Sbjct: 406 MSVLIKKGTVFPCTKRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRR 464
Query: 456 GVPQIEDTFDIDANGILK 509
G ++ T ++D NGIL+
Sbjct: 465 GESVVDITLEVDYNGILQ 482
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1
Query: 7 SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPE 147
+L DA +D A + +IVLVGGST++P V+K++ FF K N ++PE
Sbjct: 352 ALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +1
Query: 1 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
E++LR A++ I VL+G TR+PKVQ+++Q KE+ K +N +E
Sbjct: 353 EQALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +1
Query: 37 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
+I +I +VGGS+RIP ++++++D F GKE ++N +E
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 19 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
A++ I +VL+G TR+PKV+++L+ KE++ +N +E
Sbjct: 346 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 19 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPEE 150
A++ I +VL+G TR+PKV+++L+ KE++ +N +E
Sbjct: 362 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical
protein H12D21.10 protein.
Length = 523
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -2
Query: 225 QQILHLLRLVTVQDSSLDSCTISYGLFRVNRFVELLSIKEILQELLHLGDTSGATHQYN 49
Q ILH L + + L+ I L R F ++L+IKEIL+ L HL + S YN
Sbjct: 327 QFILHRLG-IRQPKADLEKARIVI-LSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYN 383
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,436,793
Number of Sequences: 27780
Number of extensions: 263935
Number of successful extensions: 815
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -