Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30341
         (310 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   0.28 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   0.37 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   0.64 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   1.1  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   6.0  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            21   7.9  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 118 SNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNFISVL 2
           S    ++AA + G+ F+S Y P PSL +  E + F+  +
Sbjct: 83  SEAQGLVAAQIGGVVFISCYAP-PSLNL-AEFERFLEAI 119


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 103 VIAAIVDGICFVSIYVPHPSL 41
           ++AA V GI F+S+Y P PSL
Sbjct: 140 LVAAQVAGITFISVYAP-PSL 159


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 103 VIAAIVDGICFVSIYVPHPSL 41
           ++AA V GI F+S+Y P PSL
Sbjct: 77  LVAAKVAGIDFISVYAP-PSL 96


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 103 VIAAIVDGICFVSIYVPHPSL 41
           +IAA V GI F+S Y P PSL
Sbjct: 134 LIAAKVGGITFLSCYAP-PSL 153


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 5  N*NEVFNFIEDLQGGMRD 58
          N   V+ F EDL GG+ D
Sbjct: 32 NQKRVYIFNEDLSGGLED 49


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 97  AAIVDGICFVSIYVPHPSLQIFNEI 23
           +++V  +    +YV H    +FNEI
Sbjct: 77  SSLVAMVAITVVYVTHKKQAMFNEI 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,111
Number of Sequences: 2352
Number of extensions: 4239
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)