Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30341
         (310 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   1.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   1.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   7.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 66   ETKQIPSTIAAMTEKQLLCEGR 131
            +T QI ST+   T + LLC  R
Sbjct: 1411 DTAQISSTVQKYTLENLLCGSR 1432


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 253 WLKPDFVFKIPGY 215
           WL+PD++F +  Y
Sbjct: 228 WLRPDWLFNLTKY 240


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 257 KLAKARFCIQNPWLFVLKRR 198
           ++  A FC   PW FV+ R+
Sbjct: 285 RMGVASFCKAFPWHFVVDRQ 304


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 241 DFVFKIPGYSCLRED 197
           +F  +IPG+S L +D
Sbjct: 251 EFAKRIPGFSLLAQD 265


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 148 TFSSFPLPSHSNCFSVIAAIV 86
           TF++FP  +H   +S+   I+
Sbjct: 191 TFNAFPTYTHEITYSLFGMIM 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,921
Number of Sequences: 438
Number of extensions: 1215
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)