Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30341
         (310 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g03620.1 68417.m00497 myosin heavy chain-related contains wea...    29   0.84 
At5g01660.1 68418.m00082 kelch repeat-containing protein similar...    27   2.6  
At4g32890.1 68417.m04680 zinc finger (GATA type) family protein ...    27   2.6  
At1g64940.1 68414.m07361 cytochrome P450, putative similar to cy...    27   3.4  
At1g16130.1 68414.m01933 wall-associated kinase, putative simila...    27   3.4  
At1g09720.1 68414.m01091 kinase interacting family protein simil...    27   3.4  
At1g10720.1 68414.m01221 BSD domain-containing protein contains ...    26   4.5  
At4g30160.1 68417.m04289 villin, putative similar to  villin 2 (...    26   5.9  
At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-...    25   7.8  
At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki...    25   7.8  

>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
           similarity to Swiss-Prot:P24733 myosin heavy chain,
           striated muscle [Aequipecten irradians]
          Length = 342

 Score = 28.7 bits (61), Expect = 0.84
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +3

Query: 72  KQIPSTIAAMTEKQLLCEGRGKEEKVLEFLMSR 170
           K++ +++AA    Q++C   GKE++++   +SR
Sbjct: 164 KELSASMAARKSLQMMCSSLGKEKEIMALELSR 196


>At5g01660.1 68418.m00082 kelch repeat-containing protein similar to
           SP|P57790 Kelch-like ECH-associated protein 1 (Cytosolic
           inhibitor of Nrf2) {Rattus norvegicus}; contains Pfam
           profile PF01344: Kelch motif
          Length = 621

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 88  VDGICFVSIYVPHPSLQIFNEIK 20
           +DG C VS  +PH   Q+ +E+K
Sbjct: 247 IDGSCLVSSPLPHTISQLMHEVK 269


>At4g32890.1 68417.m04680 zinc finger (GATA type) family protein
           GATA transcription factor 3, Arabidopsis thaliana,
           gb:Y13650
          Length = 308

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 157 NSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNFI 11
           +SST S+  L   SN  S+     DG  F  +Y+P+  +     + NF+
Sbjct: 42  DSSTLSTGTLTDSSNSSSLFT---DGTGFSDLYIPNDDIAELEWLSNFV 87


>At1g64940.1 68414.m07361 cytochrome P450, putative similar to
           cytochrome p450 GI:438242 from [Solanum melongena]
          Length = 511

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 169 LLIRNSSTFSSFPLPSHSNCFSVIAAI 89
           LL R   +FSS PLP   N F  I  +
Sbjct: 20  LLFRRRDSFSSLPLPPDPNFFPFIGTL 46


>At1g16130.1 68414.m01933 wall-associated kinase, putative similar
           to putative serine/threonine-specific protein kinase
           GI:7270012 from [Arabidopsis thaliana]
          Length = 748

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 38  LQGGMRDIDRDKTDTINNSCNDRKAVTM 121
           L GG  D+D  K D   N C D+  V +
Sbjct: 298 LPGGCVDVDECKLDIGRNQCKDQSCVNL 325


>At1g09720.1 68414.m01091 kinase interacting family protein similar
           to kinase interacting protein 1 (GI:13936326) [Petunia
           integrifolia]
          Length = 928

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = +2

Query: 35  DLQGGMRDIDRDKTDTINNSCNDRKAVTM*REREGRK 145
           +LQ  +RD+++DK   +++S + +K +T+  E E RK
Sbjct: 371 ELQDHIRDVEKDKACLVSDSMDMKKRITV-LEDELRK 406


>At1g10720.1 68414.m01221 BSD domain-containing protein contains
           Pfam profile PF03909: BSD domain
          Length = 429

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +2

Query: 23  NFIEDLQGGMRDIDRDKTDTINNSCNDRKAVTM*RERE--GRKGARVSDE 166
           NF+E L  G+ D D    D  NN  ND K      ER    R   R+S E
Sbjct: 4   NFLESLYDGIGDDDAADDDEDNN--NDEKTPKASTERHDFSRNAVRLSPE 51


>At4g30160.1 68417.m04289 villin, putative similar to  villin 2
           (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
           (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
           profiles PF00626: Gelsolin repeat, PF02209: Villin
           headpiece domain
          Length = 974

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 171 HTPPYPSALSSLKHE*PGILNTKSGFSQF 257
           H    P A SSL H+   IL+TKS   QF
Sbjct: 151 HVKEVPFARSSLNHDDIYILDTKSKIFQF 179


>At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) /
            DNA-repair protein, putative identical to UV
            hypersensitive protein [Arabidopsis thaliana]
            gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629
            DNA-repair protein complementing XP-G cells homolog
            (Xeroderma pigmentosum group G complementing protein
            homolog) [Xenopus laevis]
          Length = 1479

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 44   GGMRDIDRDKTDTINNSCNDRKAVTM*REREGRKGARVSDE 166
            GG   +D D+T   N   +D + + M  E + +KG R ++E
Sbjct: 1406 GGGFCVDEDETAEENTMDDDAEILKMESEEQRKKGKRRNEE 1446


>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  ETKQIPSTIAAMTEKQLLCEGRGKEEKVLE 155
           E ++  +T   + EK  LC+ RG EEK  E
Sbjct: 9   EEEEEEATEVLLVEKTKLCKRRGDEEKTEE 38


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,386,542
Number of Sequences: 28952
Number of extensions: 92669
Number of successful extensions: 276
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 321405440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)