Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30340X
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   5.5  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   5.5  
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    23   9.6  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 117 NNRTTSEDINDRTISQKRPESTSSSDIIARTRSPSV 224
           N++T S D +  T S      TSS  +    RSP V
Sbjct: 129 NSQTRSFDCDSSTGSMASAPGTSSVPLTIHRRSPGV 164


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 117 NNRTTSEDINDRTISQKRPESTSSSDIIARTRSPSV 224
           N++T S D +  T S      TSS  +    RSP V
Sbjct: 129 NSQTRSFDCDSSTGSMASAPGTSSVPLTIHRRSPGV 164


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 401 ADGDKGGPR-NVRPIQSPKDQPHGQPSNF 484
           +D D+   + NV    SPKD+P   P +F
Sbjct: 35  SDSDEAAEQPNVEKDDSPKDKPDIDPVDF 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,846
Number of Sequences: 2352
Number of extensions: 10960
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)