Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30335
(494 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 112 5e-24
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 108 8e-23
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 101 7e-21
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 99 3e-20
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 99 6e-20
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 69 4e-11
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 58 8e-08
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 57 2e-07
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 56 3e-07
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 51 2e-05
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 49 7e-05
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 42 0.008
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 39 0.071
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 34 2.0
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 3.5
UniRef50_Q232P0 Cluster: MHCK/EF2 kinase domain family protein; ... 33 3.5
UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum... 32 6.1
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.1
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 112 bits (269), Expect = 5e-24
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 188
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 189 FHFRKNKNFCPVLNLDKLWTLV 254
+H ++N++FCP +NLDKLWTLV
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLV 82
Score = 46.0 bits (104), Expect = 5e-04
Identities = 28/88 (31%), Positives = 38/88 (43%)
Frame = +2
Query: 188 FPL*KEQEFLSSFELR*ALDISPEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 367
+ L + Q F + L + EQTR+ A G P+I++V++ PKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 368 PVIVXXXXXXXXXXXXXXDVGGACVLSA 451
PVIV VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 108 bits (259), Expect = 8e-23
Identities = 49/82 (59%), Positives = 55/82 (67%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 188
MAT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 189 FHFRKNKNFCPVLNLDKLWTLV 254
FH +NK FCP++NLDKLW+LV
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLV 82
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 101 bits (243), Expect = 7e-21
Identities = 45/80 (56%), Positives = 51/80 (63%)
Frame = +3
Query: 15 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 194
T K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH
Sbjct: 54 TQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFH 113
Query: 195 FRKNKNFCPVLNLDKLWTLV 254
KN+ CP +N+DKLWTLV
Sbjct: 114 KLKNQTVCPTINIDKLWTLV 133
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 99 bits (238), Expect = 3e-20
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +3
Query: 108 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 254
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+LV
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLV 68
Score = 45.6 bits (103), Expect = 6e-04
Identities = 27/65 (41%), Positives = 31/65 (47%)
Frame = +2
Query: 257 EQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGA 436
E+TR YA D K PVI++VKA PKQPVIV VGGA
Sbjct: 70 EKTRTTYAEKKD-KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGA 128
Query: 437 CVLSA 451
C+L A
Sbjct: 129 CILVA 133
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 98.7 bits (235), Expect = 6e-20
Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXN--AGGEHHHRINMDKYHPGYFGKLGM 182
M + KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 183 RNFHFRKNKNFCPVLNLDKLWTLV 254
R FH +KN CPV+N+DKLW+LV
Sbjct: 61 RTFHLKKNPLHCPVVNIDKLWSLV 84
Score = 41.1 bits (92), Expect = 0.013
Identities = 25/65 (38%), Positives = 30/65 (46%)
Frame = +2
Query: 257 EQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGA 436
+ TR KYA KVPVI++ KA P QPV+V VGGA
Sbjct: 86 DATRQKYAEDKK-KVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRIVAVGGA 144
Query: 437 CVLSA 451
CVL+A
Sbjct: 145 CVLTA 149
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 69.3 bits (162), Expect = 4e-11
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 188
M T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR
Sbjct: 1 MPTDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRY 60
Query: 189 FHFRKNKNFCPVLNLDKL 242
+ K NF +NLDK+
Sbjct: 61 YRKLKQNNFNKSINLDKI 78
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 58.4 bits (135), Expect = 8e-08
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 188
M KKTRKLRGHVS AGG H + ++HP Y GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 189 FHFRKNKNFCPVLNLDKLWTLV 254
+H ++N ++ ++ +LW ++
Sbjct: 61 YHRKENSDYARPISSARLWGMI 82
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.2 bits (132), Expect = 2e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +3
Query: 144 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 254
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 56.4 bits (130), Expect = 3e-07
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +3
Query: 117 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 254
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLV 122
Score = 52.4 bits (120), Expect = 5e-06
Identities = 25/50 (50%), Positives = 26/50 (52%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 158
M T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 1 MPTHLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 188
M T KK+RK+RG S +GG+HHH+I ++Y YF K GMR
Sbjct: 1 MVTKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRI 60
Query: 189 FHFRKNKN 212
++ K N
Sbjct: 61 YNLEKTLN 68
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 48.8 bits (111), Expect = 7e-05
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGK--LGM 182
M TS+KKTR LR HVS H R + PG G +GM
Sbjct: 1 MTTSRKKTRNLREHVSVG---------------------HGRFGKHRKLPGSRGNAGVGM 39
Query: 183 RNFHFRKNKNFCPVLNLDKLWTLVLNR 263
R FH +NK +C ++NLDKLW++VL +
Sbjct: 40 RYFHKLRNKFYCQIVNLDKLWSMVLGK 66
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 41.9 bits (94), Expect = 0.008
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = -1
Query: 254 D*CPKLI*VQNWTEILVLSKVEISHTKFAKVSRMVLVHVDXXXXXXXXXXXXXXXXXVLS 75
D CP+ + VQ+W + L VE+SHT +++ MV +HV+ VL+
Sbjct: 71 DQCPQFVQVQDWLPEMSLLLVEVSHTNLTEITWMVFIHVNSVVMLTTGHTSTTGVLSVLT 130
Query: 74 DTTMS 60
DTT +
Sbjct: 131 DTTFT 135
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 38.7 bits (86), Expect = 0.071
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +3
Query: 9 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 161
M+ +KTRK +GHVS NAGGEH HRIN PG
Sbjct: 1 MSGRLRKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3
Query: 441 TQAPPTSLIFFSADFEKNFAFTMTGCLGSLPL 346
T A SL FFS D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 3.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 143 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 232
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_Q232P0 Cluster: MHCK/EF2 kinase domain family protein;
n=1; Tetrahymena thermophila SB210|Rep: MHCK/EF2 kinase
domain family protein - Tetrahymena thermophila SB210
Length = 842
Score = 33.1 bits (72), Expect = 3.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 299 PCHLEQMHTSASSVQD*CPKLI*VQNWTEILVLSKVEIS 183
PCH ++ HT+A + CPK + ++ E L +E+S
Sbjct: 184 PCHGKKYHTTADDYPEGCPKGVNIEGLIETLAKRNIELS 222
>UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L15 - Cenarchaeum
symbiosum
Length = 138
Score = 32.3 bits (70), Expect = 6.1
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 MATSKKKTRKLRG-HVSXXXXXXXXXXXXXXXXXNAGGE-HHHRINMDKYHPGYFGKLGM 182
MAT +KTRKLRG G+ HH +M K PG+FG
Sbjct: 1 MATRNRKTRKLRGSRTHGWGQVGQHRASGHKGGVGVSGQLKHHFSSMLKEDPGHFGHDST 60
Query: 183 RNFHFRKNKNFCPVLNLDKLWT 248
H K + V +LD T
Sbjct: 61 HPPHSNAAKKWASVRDLDDFHT 82
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.9 bits (69), Expect = 8.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 216 RNSCSF*SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 79
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,323,187
Number of Sequences: 1657284
Number of extensions: 8234730
Number of successful extensions: 19571
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19553
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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