Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30334X
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.25 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   1.8  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   1.8  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   1.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   9.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   9.5  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -3

Query: 206 ESLLVVAASDTKYIALPF-IA*LISLYFGAHALFVKDTKLVLVHHFEQ 66
           ++L VVA + TK   LPF +  +I + F  +  FV  T+++ V ++EQ
Sbjct: 97  QNLKVVATTKTKAWFLPFVVTNIIFVLFHTYEAFVW-TRIMGVAYYEQ 143


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 79  TTSNNFWHPVAGYETFNFMTAVNP 8
           +TSNN WH   G  + N     NP
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNP 393


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 24  MKLNVSYPATGCQKLFEVVDEHKLRI 101
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 24  MKLNVSYPATGCQKLFEVVDEHKLRI 101
           M ++   P+TG Q + +VV  HKL++
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLKL 79


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 290 HRGAVCNMSGHLHQKTN 240
           H+GAVC++    +Q  N
Sbjct: 133 HQGAVCHLETRPNQSDN 149


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 284 GAVCNMSGHLHQKTNTAVCQDAMFH 210
           G+  +MSG +HQ  N +    ++ H
Sbjct: 196 GSWLDMSGGMHQMANYSTDYSSLTH 220


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 185 RQRQARIPDETWRPDKQPCSSSDANG 262
           RQ+++  P  TW+   Q C      G
Sbjct: 47  RQKKSHPPQWTWQCINQRCERRHIKG 72


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 277 YVT*VAICIRRRTRLFVRTPCF 212
           ++T V +  +RRT L   TP F
Sbjct: 452 FITLVDVSTKRRTELEDLTPTF 473



 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 344 PRDWRQQYIHEMIYV 300
           P D+R+++  E IYV
Sbjct: 236 PHDYRKRFRMEKIYV 250


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 20  SHEVKRFVPG 49
           +HE+K+ +PG
Sbjct: 769 NHEIKKVIPG 778


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 79  WTSTSFVSFTKSAW 120
           WTS   +SF +  W
Sbjct: 294 WTSKEKISFLRGFW 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,974
Number of Sequences: 336
Number of extensions: 1785
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)