Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30334X
(376 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 133 2e-31
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 133 2e-31
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 133 2e-31
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 131 8e-31
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 131 8e-31
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 129 3e-30
BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein. 95 5e-20
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 80 2e-15
AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6 pr... 80 3e-15
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 69 4e-12
BX537838-1|CAD97850.1| 1410|Homo sapiens hypothetical protein pr... 28 8.6
BC013357-1|AAH13357.1| 624|Homo sapiens ring finger protein 12 ... 28 8.6
AL589764-5|CAI16807.1| 1410|Homo sapiens pogo transposable eleme... 28 8.6
AL589764-4|CAI16808.2| 1357|Homo sapiens pogo transposable eleme... 28 8.6
AL589764-3|CAI16809.1| 1366|Homo sapiens pogo transposable eleme... 28 8.6
AL589764-2|CAI16810.1| 1315|Homo sapiens pogo transposable eleme... 28 8.6
AL513007-2|CAI41712.1| 624|Homo sapiens ring finger protein 12 ... 28 8.6
AK001334-1|BAA91632.1| 624|Homo sapiens protein ( Homo sapiens ... 28 8.6
AJ271670-1|CAC14228.1| 624|Homo sapiens RING zinc finger LIM do... 28 8.6
AF155109-1|AAD42875.1| 483|Homo sapiens putative ring zinc fing... 28 8.6
AB007930-1|BAA32306.1| 1355|Homo sapiens KIAA0461 perotein protein. 28 8.6
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 133 bits (322), Expect = 2e-31
Identities = 67/116 (57%), Positives = 78/116 (67%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 131 bits (316), Expect = 8e-31
Identities = 66/116 (56%), Positives = 77/116 (66%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE LR FYEKRM EV AD LG+EWKGYV+R++ GNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERTLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 131 bits (316), Expect = 8e-31
Identities = 66/116 (56%), Positives = 77/116 (66%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDK G
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKXG 60
Query: 204 FPMKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
FPMK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 115
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 78 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 129 bits (312), Expect = 3e-30
Identities = 65/114 (57%), Positives = 76/114 (66%)
Frame = +3
Query: 30 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQGFP 209
LN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++ GNDKQGFP
Sbjct: 1 LNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFP 60
Query: 210 MKHGVLTNSRVRLLMQMATHVTYRSAMERENVNHFVDVLLTPISRSWLLLLCAK 371
MK GVLT+ RVRLL+ H YR E V + + S L L+ K
Sbjct: 61 MKQGVLTHGRVRLLLSKG-HSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVK 113
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 76 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 115
>BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein.
Length = 99
Score = 95.5 bits (227), Expect = 5e-20
Identities = 49/99 (49%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAXGNDKQG 203
MKLN S+ A GCQKL +V DE KLR FYEK M E+ A LG+EWKGYV+R++ GN+KQG
Sbjct: 1 MKLNSSFLAIGCQKLIKVEDERKLRTFYEKHMATEIAAYALGEEWKGYVVRISGGNNKQG 60
Query: 204 FPM-----KHGVLTNSRVRLLMQMATHVTY-RSAMEREN 302
F K G+LT+ RL + ++ + EREN
Sbjct: 61 FLFVGGNNKQGILTHGHARLPVTFLLYIDQGKLEKEREN 99
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 80.2 bits (189), Expect = 2e-15
Identities = 42/85 (49%), Positives = 51/85 (60%)
Frame = +3
Query: 117 MGAEVEADQLGDEWKGYVLRVAXGNDKQGFPMKHGVLTNSRVRLLMQMATHVTYRSAMER 296
M EV AD LG+EWKGYV+R++ GNDKQGFPMK GVLT+ RVRLL+ H YR
Sbjct: 1 MATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKG-HSCYRPRRTG 59
Query: 297 ENVNHFVDVLLTPISRSWLLLLCAK 371
E V + + S L L+ K
Sbjct: 60 ERKRKSVRGCIVDANLSVLNLVIVK 84
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 47 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 86
>AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6
protein.
Length = 91
Score = 79.8 bits (188), Expect = 3e-15
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 24 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 161
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +2
Query: 254 ANGHSCYIPLRDGERKRKSFRGCIVDANLSVLALVIVRKG 373
+ GHSCY P R GERKRKS RGCIVDANLSVL LVIV+KG
Sbjct: 7 SKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 46
>BX537838-1|CAD97850.1| 1410|Homo sapiens hypothetical protein
protein.
Length = 1410
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 336 LASTIHPRNDLRFLSPSRSGM*HEWPFASEDEHGCLSGRHVSSGILACRCRXRHEVHSPS 157
L +++ P D SP+R+ E AS +E LSG H S R + S
Sbjct: 1324 LVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPES 1383
Query: 156 IHRL 145
+H+L
Sbjct: 1384 LHQL 1387
>BC013357-1|AAH13357.1| 624|Homo sapiens ring finger protein 12
protein.
Length = 624
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 357 TRAKTERLASTIHPRNDL-RFLSPSRSGM*HEWPFASEDEHGCLSGRHVS 211
TRA+ ER S +HP +++ R S S E P +E E + HV+
Sbjct: 221 TRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRHHVT 270
>AL589764-5|CAI16807.1| 1410|Homo sapiens pogo transposable element
with ZNF domain protein.
Length = 1410
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 336 LASTIHPRNDLRFLSPSRSGM*HEWPFASEDEHGCLSGRHVSSGILACRCRXRHEVHSPS 157
L +++ P D SP+R+ E AS +E LSG H S R + S
Sbjct: 1324 LVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPES 1383
Query: 156 IHRL 145
+H+L
Sbjct: 1384 LHQL 1387
>AL589764-4|CAI16808.2| 1357|Homo sapiens pogo transposable element
with ZNF domain protein.
Length = 1357
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 336 LASTIHPRNDLRFLSPSRSGM*HEWPFASEDEHGCLSGRHVSSGILACRCRXRHEVHSPS 157
L +++ P D SP+R+ E AS +E LSG H S R + S
Sbjct: 1271 LVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPES 1330
Query: 156 IHRL 145
+H+L
Sbjct: 1331 LHQL 1334
>AL589764-3|CAI16809.1| 1366|Homo sapiens pogo transposable element
with ZNF domain protein.
Length = 1366
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 336 LASTIHPRNDLRFLSPSRSGM*HEWPFASEDEHGCLSGRHVSSGILACRCRXRHEVHSPS 157
L +++ P D SP+R+ E AS +E LSG H S R + S
Sbjct: 1280 LVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPES 1339
Query: 156 IHRL 145
+H+L
Sbjct: 1340 LHQL 1343
>AL589764-2|CAI16810.1| 1315|Homo sapiens pogo transposable element
with ZNF domain protein.
Length = 1315
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 336 LASTIHPRNDLRFLSPSRSGM*HEWPFASEDEHGCLSGRHVSSGILACRCRXRHEVHSPS 157
L +++ P D SP+R+ E AS +E LSG H S R + S
Sbjct: 1229 LVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPES 1288
Query: 156 IHRL 145
+H+L
Sbjct: 1289 LHQL 1292
>AL513007-2|CAI41712.1| 624|Homo sapiens ring finger protein 12
protein.
Length = 624
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 357 TRAKTERLASTIHPRNDL-RFLSPSRSGM*HEWPFASEDEHGCLSGRHVS 211
TRA+ ER S +HP +++ R S S E P +E E + HV+
Sbjct: 221 TRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRHHVT 270
>AK001334-1|BAA91632.1| 624|Homo sapiens protein ( Homo sapiens
cDNA FLJ10472 fis, clone NT2RP2000054. ).
Length = 624
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 357 TRAKTERLASTIHPRNDL-RFLSPSRSGM*HEWPFASEDEHGCLSGRHVS 211
TRA+ ER S +HP +++ R S S E P +E E + HV+
Sbjct: 221 TRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRHHVT 270
>AJ271670-1|CAC14228.1| 624|Homo sapiens RING zinc finger LIM
domain binding protein protein.
Length = 624
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 357 TRAKTERLASTIHPRNDL-RFLSPSRSGM*HEWPFASEDEHGCLSGRHVS 211
TRA+ ER S +HP +++ R S S E P +E E + HV+
Sbjct: 221 TRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRHHVT 270
>AF155109-1|AAD42875.1| 483|Homo sapiens putative ring zinc finger
protein NY-REN-43 antigen protein.
Length = 483
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 357 TRAKTERLASTIHPRNDL-RFLSPSRSGM*HEWPFASEDEHGCLSGRHVS 211
TRA+ ER S +HP +++ R S S E P +E E + HV+
Sbjct: 80 TRARAERSRSPLHPMSEIPRRSHHSISSQTFEHPLVNETEGSSRTRHHVT 129
>AB007930-1|BAA32306.1| 1355|Homo sapiens KIAA0461 perotein protein.
Length = 1355
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 336 LASTIHPRNDLRFLSPSRSGM*HEWPFASEDEHGCLSGRHVSSGILACRCRXRHEVHSPS 157
L +++ P D SP+R+ E AS +E LSG H S R + S
Sbjct: 1269 LVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPES 1328
Query: 156 IHRL 145
+H+L
Sbjct: 1329 LHQL 1332
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,379,291
Number of Sequences: 237096
Number of extensions: 1099274
Number of successful extensions: 2753
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2753
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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