Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30333
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    26   0.40 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 502 DTLKHVLFKL-YFTLSFKCVSCMFLTVLLQSYMY 600
           D  + V+F L YF L+F C+S  +  V   ++ Y
Sbjct: 157 DYKQPVVFDLVYFILAFACISIAYTNVSTDAFFY 190


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 177 KLSNNFAGGRAYCEPARVGTAILTNSTAKQMFVW 76
           +L   F   +  C P R+  A   N T +Q+ +W
Sbjct: 99  ELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIW 132


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 177 KLSNNFAGGRAYCEPARVGTAILTNSTAKQMFVW 76
           +L   F   +  C P R+  A   N T +Q+ +W
Sbjct: 119 ELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIW 152


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 177 KLSNNFAGGRAYCEPARVGTAILTNSTAKQMFVW 76
           +L   F   +  C P R+  A   + T +Q+ VW
Sbjct: 18  ELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVW 51


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +2

Query: 146 ALPPAKLLLNFESIISIRYYLPLMVLDLISISFFGQMIVRVQSLHSIKQSRFLCP 310
           AL P +L+    +I  +  +  +  + L+++ F G  I R + L  +KQ R L P
Sbjct: 62  ALSPFELI-QIRTINFVATFRTIANIILMAVLFLGTFIGRAKFLAILKQMRNLEP 115


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 177 KLSNNFAGGRAYCEPARVGTAILTNSTAKQMFVW 76
           +L   F   +  C P R+  A   + T +Q+ VW
Sbjct: 149 ELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVW 182


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 517 VLFKLYFTLSFKCVSCMFLTVLLQSYMYYDIDFFTL 624
           ++F ++F L        F+ +L   Y YY    FT+
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTV 125


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +2

Query: 194 IRYYLPLMVLDLISISFFGQMIVRVQSLH 280
           + +Y P+  +    ++FFG +   + S H
Sbjct: 110 VHFYYPVATMSFYVLNFFGSIQFIIISKH 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,643
Number of Sequences: 336
Number of extensions: 4073
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)