Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30333
         (801 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069321-1|AAL39466.1|  562|Drosophila melanogaster LD03740p pro...    30   4.2  
AF220496-1|AAF33245.1|  781|Drosophila melanogaster arm repeat p...    30   4.2  
AE013599-18|ABI31015.1|  767|Drosophila melanogaster CG17484-PB,...    30   4.2  
AE013599-17|EAA45985.1|  781|Drosophila melanogaster CG17484-PA,...    30   4.2  
BT023816-1|AAZ66323.1|  379|Drosophila melanogaster LP21446p pro...    29   9.8  

>AY069321-1|AAL39466.1|  562|Drosophila melanogaster LD03740p
           protein.
          Length = 562

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +2

Query: 659 YARTGWRAHGLNLRKFV--NTSPN*SSAPQNLRPDRKRPLRRSGEKRYE 799
           Y + GW+      + F   NT P   S+P N+     RP+   G  RYE
Sbjct: 480 YKKNGWKEQDFVSKHFTAHNTPP---SSPNNVNNTLNRPMASQGRTRYE 525


>AF220496-1|AAF33245.1|  781|Drosophila melanogaster arm repeat
           protein protein.
          Length = 781

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +2

Query: 659 YARTGWRAHGLNLRKFV--NTSPN*SSAPQNLRPDRKRPLRRSGEKRYE 799
           Y + GW+      + F   NT P   S+P N+     RP+   G  RYE
Sbjct: 699 YKKNGWKEQDFVSKHFTAHNTPP---SSPNNVNNTLNRPMASQGRTRYE 744


>AE013599-18|ABI31015.1|  767|Drosophila melanogaster CG17484-PB,
           isoform B protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +2

Query: 659 YARTGWRAHGLNLRKFV--NTSPN*SSAPQNLRPDRKRPLRRSGEKRYE 799
           Y + GW+      + F   NT P   S+P N+     RP+   G  RYE
Sbjct: 685 YKKNGWKEQDFVSKHFTAHNTPP---SSPNNVNNTLNRPMASQGRTRYE 730


>AE013599-17|EAA45985.1|  781|Drosophila melanogaster CG17484-PA,
           isoform A protein.
          Length = 781

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +2

Query: 659 YARTGWRAHGLNLRKFV--NTSPN*SSAPQNLRPDRKRPLRRSGEKRYE 799
           Y + GW+      + F   NT P   S+P N+     RP+   G  RYE
Sbjct: 699 YKKNGWKEQDFVSKHFTAHNTPP---SSPNNVNNTLNRPMASQGRTRYE 744


>BT023816-1|AAZ66323.1|  379|Drosophila melanogaster LP21446p
           protein.
          Length = 379

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 584 FNHTCITILTFSPYLFAG-SIWGYSSYARTGWRAHGLNLRKFVNTSPN*SSAPQN 745
           FNH C  I+  SPY+ +G +    S  A +      +    +  T P  SS PQN
Sbjct: 42  FNHVCCDIIIKSPYIPSGPNEESDSESASSSTEEENIPTFIYFPTRPTVSSEPQN 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,445,389
Number of Sequences: 53049
Number of extensions: 692228
Number of successful extensions: 1383
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)