Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30333
         (801 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   1.1  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           25   1.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   1.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   7.6  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 199 VLFTSYGFRLNIYIFFRTNDRTCPITT*YKTKSLSL 306
           V+F +  +RL I  F  T D   P     K +S++L
Sbjct: 151 VIFVTINYRLGILGFLSTEDEVVPGNMGLKDQSMAL 186


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 199 VLFTSYGFRLNIYIFFRTNDRTCPITT*YKTKSLSL 306
           V+F +  +RL I  F  T D   P     K +S++L
Sbjct: 22  VIFVTINYRLGILGFLSTEDEVVPGNMGLKDQSMAL 57


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 199 VLFTSYGFRLNIYIFFRTNDRTCPITT*YKTKSLSL 306
           V+F +  +RL I  F  T D   P     K +S++L
Sbjct: 151 VIFVTINYRLGILGFLSTEDEVVPGNMGLKDQSMAL 186


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
 Frame = +3

Query: 6   SHITVDTGGKSQLYC------ISAVPP*KPKQTSVSR*NS*GWRCQPVQVHNTPYHQ 158
           S ++ D+     +YC      +  V   +   + V R  S GWR     VH TP+ Q
Sbjct: 92  SFLSSDSASSGNVYCKCDDCLLGIVDDYQRNPSVVGRKKSSGWRKLRNIVHWTPFFQ 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,371
Number of Sequences: 438
Number of extensions: 4867
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)