Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30332X
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.57 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   9.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   9.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 125 HPGYFGKLGMRNVHFRKNKKVC 190
           HP YFGK G + V   K  K C
Sbjct: 303 HPTYFGKTGRKTV--LKTNKYC 322


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 185 PSCSF*SGHFSCQVCQS 135
           P+  F  G F+C+ C+S
Sbjct: 11  PAAGFHFGAFTCEGCKS 27


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 78  PRPPGCLRCFPIRP 37
           P P G L  +P RP
Sbjct: 65  PSPRGALGAYPFRP 78


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 101 HRINMDKYHPGYFGKLGMRNVHFRKNKK 184
           + I   K+  G+F   GM+ V  R+  K
Sbjct: 353 YNIISSKFRSGFFKLCGMKIVKKRRKDK 380


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 215 WTLVSEQTRLK 247
           WT++S  TR+K
Sbjct: 54  WTVISASTRIK 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,728
Number of Sequences: 336
Number of extensions: 2371
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)