Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30332X
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0027 + 16593133-16593573 83 7e-17
02_01_0563 + 4134954-4135388 83 7e-17
07_03_1250 - 25183375-25183815 82 2e-16
11_08_0012 + 27623055-27623277,27623291-27625165,27625456-276255... 29 1.7
02_05_0546 + 29889861-29890182,29891057-29892798 29 2.3
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 3.0
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 28 3.9
09_04_0302 + 16501020-16501049,16501568-16501659,16502063-165021... 27 5.2
08_02_1287 - 25886509-25886766,25886887-25887004,25887098-258871... 27 5.2
02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486 27 5.2
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 27 5.2
11_04_0289 - 15804766-15804977,15805742-15805862,15806541-158067... 27 6.9
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662... 27 6.9
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 27 6.9
04_03_1020 - 21761297-21761555,21761630-21761739,21762402-217626... 27 6.9
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 27 6.9
08_02_1146 + 24678142-24678258,24678550-24678587,24678997-246790... 27 9.1
03_05_0422 - 24076917-24077125,24077209-24077266,24077350-240773... 27 9.1
01_06_0884 + 32715963-32716284,32716837-32717567 27 9.1
>03_04_0027 + 16593133-16593573
Length = 146
Score = 83.4 bits (197), Expect = 7e-17
Identities = 37/74 (50%), Positives = 44/74 (59%)
Frame = +2
Query: 5 RKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNVHFRKNKK 184
RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR H N+
Sbjct: 9 RKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLSNRF 68
Query: 185 VCPVLNVDKRWTLV 226
CP +NV++ W++V
Sbjct: 69 HCPAVNVERLWSMV 82
Score = 57.6 bits (133), Expect = 4e-09
Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 265 GKGPVINIVKAGYYKLLCKGKLPKQ-PVIV*AKFFSKSAEKIIKDVGGACVLSA 423
GK PVI++ + GY K+L KG LP Q P++V AK SK AEK IK GGA +L+A
Sbjct: 93 GKAPVIDVTQFGYTKVLGKGMLPPQRPIVVKAKLISKVAEKKIKAAGGAVLLTA 146
>02_01_0563 + 4134954-4135388
Length = 144
Score = 83.4 bits (197), Expect = 7e-17
Identities = 37/74 (50%), Positives = 44/74 (59%)
Frame = +2
Query: 5 RKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNVHFRKNKK 184
RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR H N+
Sbjct: 9 RKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLSNRF 68
Query: 185 VCPVLNVDKRWTLV 226
CP +NV++ W++V
Sbjct: 69 HCPAVNVERLWSMV 82
Score = 56.8 bits (131), Expect = 7e-09
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 265 GKGPVINIVKAGYYKLLCKGKLP-KQPVIV*AKFFSKSAEKIIKDVGGACVLSA 423
GK PVI++ + GY K+L KG LP ++P++V AK SK AEK IK GGA +L+A
Sbjct: 91 GKAPVIDVTQFGYTKVLGKGMLPPERPIVVKAKLISKVAEKKIKAAGGAVLLTA 144
>07_03_1250 - 25183375-25183815
Length = 146
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/74 (50%), Positives = 44/74 (59%)
Frame = +2
Query: 5 RKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNVHFRKNKK 184
RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR H +NK
Sbjct: 9 RKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKF 68
Query: 185 VCPVLNVDKRWTLV 226
P +NV++ W++V
Sbjct: 69 YSPAVNVERLWSMV 82
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +1
Query: 265 GKGPVINIVKAGYYKLLCKGKLPKQPVIV*AKFFSKSAEKIIKDVGGACVLSA 423
GK P++++ + GY+K+L KG LP++P++V AK SK AEK IK GGA VL+A
Sbjct: 94 GKAPLLDVTQFGYFKVLGKGLLPEKPIVVKAKLISKVAEKKIKAAGGAVVLTA 146
>11_08_0012 +
27623055-27623277,27623291-27625165,27625456-27625567,
27625586-27626130,27626305-27626591,27626770-27626805
Length = 1025
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 341 GCLGSLPLHSNL*YPALTILMTGPLPSGAMHTSASSVQRLMSN 213
GC+GSLP+ +L + A +TG +P + S S L+SN
Sbjct: 213 GCIGSLPILQHLNFQANN--LTGAVPPAIFNMSKLSTISLISN 253
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 28.7 bits (61), Expect = 2.3
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Frame = -1
Query: 272 PLPSGAMHTS-ASSVQRLMSNAYLRSKLDRPSCSF*SGHFSCQVCQ-SIQD--GTCPC*F 105
P P+ A H+ A SVQR++ PS + CQ+C+ +I D C
Sbjct: 168 PKPTFANHSEIAKSVQRVLHQPANHPSWIPPSTEYMRSRLDCQICKVAIMDMESLLVCDA 227
Query: 104 CD-GAH---HQHY 78
C+ GAH QHY
Sbjct: 228 CEKGAHLKCLQHY 240
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 279 HQYCQSWILQVAMQRQTPQTTCHSISKVLLKISREDNQGCGWC 407
H Y S ILQ +QR + + V + I N+G WC
Sbjct: 437 HTYLDSAILQHQLQRLSEHNLLKATPSVFVVIQAIVNEGAVWC 479
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -3
Query: 291 DNIDDGALAIWSNAYFSLVCSETNVQRLSTFKTGQTFLFFLKWTFLMPS-LPKYPGWYLS 115
D+I++G + + +F L + L F + LF+ WT+ +PS + K P +L+
Sbjct: 374 DSIENGRMYMGVQ-FFGLAEMGAALANLPVFFKQRDLLFYPAWTYSLPSWIIKTPISFLN 432
Query: 114 MLIL*WCSPPALPRPPGCLRCF 49
+I + + P RCF
Sbjct: 433 TIIWVSITYYVIGFDPNIERCF 454
>09_04_0302 +
16501020-16501049,16501568-16501659,16502063-16502198,
16502297-16502727,16502950-16503028
Length = 255
Score = 27.5 bits (58), Expect = 5.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 107 FCDGAHHQHYHDLLDAYG 54
+C+G HH H H D+ G
Sbjct: 132 YCNGGHHHHGHQCYDSVG 149
>08_02_1287 -
25886509-25886766,25886887-25887004,25887098-25887177,
25887258-25887338,25887493-25887576,25888013-25888171,
25888660-25888752,25888928-25888945,25889194-25889280,
25889634-25889760,25889849-25889920,25890319-25890404,
25890519-25890626,25890709-25890850,25891432-25891508,
25891902-25892054,25892411-25892503,25892608-25892790,
25892924-25893334
Length = 809
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 88 W*APSQNQHGQVPSWILWQTWHEK 159
W A Q GQ P W +W W+ K
Sbjct: 490 WDAGGLYQVGQFPHWKIWSEWNGK 513
>02_02_0525 -
11182043-11182080,11182386-11182511,11182760-11183486
Length = 296
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 90 PPALPRPPGCLRCFPIRPCP 31
PPA P PP L C P+ P P
Sbjct: 10 PPAPPSPPPALPCDPMPPPP 29
>01_06_0556 +
30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 258 SNAYFSLVCSETNVQRLSTFKTGQTFLFFLKWTFLMPSL 142
+N + + RL F + FLF+ WTF +P++
Sbjct: 609 TNMFSGFADLSLTLARLPVFYKHRDFLFYRPWTFALPNV 647
>11_04_0289 -
15804766-15804977,15805742-15805862,15806541-15806776,
15807639-15807766,15807873-15807910,15808041-15808129,
15808669-15808774,15811395-15811580
Length = 371
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 276 RHQYCQSWILQVAMQRQTPQTTCHSISKVLLKISRED 386
RH Y S + ++ Q +PQ IS V L+++ +D
Sbjct: 170 RHHYITSILARMDYQVPSPQAEGEDISNVKLRVAEDD 206
>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
21366685-21366813,21366999-21367103,21367196-21367387,
21367486-21367639,21368148-21368209,21368291-21368437,
21368517-21368564,21369091-21369228,21369305-21369451,
21370579-21370665,21370754-21370861,21370941-21371041,
21371870-21371996,21372820-21372936,21373029-21373106,
21373240-21373284,21373637-21373756,21373838-21373964,
21374033-21374253,21374347-21374529,21374772-21374924,
21375051-21375146,21375226-21375331,21375410-21375492,
21375576-21375728,21375819-21376058,21376367-21376414,
21376782-21376928,21377007-21377115,21377200-21377345,
21377715-21377809,21377944-21378049,21378177-21378368,
21378456-21378686,21378772-21378866,21379426-21379529,
21380040-21380284,21380300-21380347,21380376-21380480,
21380630-21380767,21381458-21381649,21381738-21381914,
21382001-21382129,21382203-21382316,21382407-21382746,
21382836-21383064,21383155-21383455,21384311-21384358,
21387963-21388355
Length = 2493
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 282 QYCQSWILQVAMQRQTPQTTCHSISKVLLKISREDNQ 392
QYC ILQ++ R T +I +VL KIS N+
Sbjct: 907 QYCNH-ILQISHLRATHAELVAAIERVLAKISSSQNE 942
>09_04_0247 +
16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 290 TILMTGPLPSGAMHTSASSVQRLMSNAYLRSKLDRPSCS 174
++ + GP + A+ ASS S++Y+R+ L PS S
Sbjct: 59 SLALVGPAAAAAVAAVASSFSSSSSSSYVRNGLPPPSSS 97
>04_03_1020 -
21761297-21761555,21761630-21761739,21762402-21762635,
21762710-21762817,21762910-21762969,21763549-21763624,
21763710-21763870,21764485-21764547,21764657-21764744,
21765062-21765592,21766344-21766783
Length = 709
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 93 SPP-ALPRPPGCLRCFPIRPCP 31
SPP LP PPG C P+ P P
Sbjct: 263 SPPHPLPLPPGPATCSPLPPSP 284
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = -1
Query: 164 GHFSCQVC-QSIQDGTCPC*FCDGAH 90
GH C C S+ DG C C G H
Sbjct: 137 GHVYCMSCLSSLDDGALKCQVCGGLH 162
>08_02_1146 +
24678142-24678258,24678550-24678587,24678997-24679012,
24679874-24680002,24680073-24680229,24680337-24680530,
24680668-24680916,24681196-24681309,24681949-24681990,
24682402-24682572,24682932-24683104,24683378-24683624,
24684046-24684130,24684401-24684510,24684714-24684977,
24685885-24685950,24686431-24686525,24686780-24686858
Length = 781
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/30 (30%), Positives = 12/30 (40%)
Frame = +3
Query: 270 GPRHQYCQSWILQVAMQRQTPQTTCHSISK 359
GP H WI + Q P+ HS +
Sbjct: 258 GPMHNAADKWITEFGKQNNNPEEWAHSFEQ 287
>03_05_0422 -
24076917-24077125,24077209-24077266,24077350-24077399,
24077494-24077754,24077837-24078230,24081256-24081366,
24082255-24082596
Length = 474
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 86 GGEHHHRINMDKYH 127
GG HHH+ NM K H
Sbjct: 313 GGGHHHKQNMQKQH 326
>01_06_0884 + 32715963-32716284,32716837-32717567
Length = 350
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 99 WCSPPALPRPPGCLRCFP 46
WC PA+P+ RCFP
Sbjct: 186 WCPVPAMPQVDWEFRCFP 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,124,288
Number of Sequences: 37544
Number of extensions: 261553
Number of successful extensions: 930
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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