Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30331
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 111 5e-26
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 109 4e-25
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 89 4e-19
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 56 3e-09
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 47 2e-06
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 33 0.021
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.028
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.049
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.085
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.26
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 25 0.26
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.46
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 28 1.1
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 1.8
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 27 1.8
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.8
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 2.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.2
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.2
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.2
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.2
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 4.2
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 4.2
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 26 4.2
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 4.2
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 5.6
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 5.6
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 25 5.6
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 5.6
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 25 5.6
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 5.6
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 7.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 7.4
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 7.4
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 9.8
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.8
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 9.8
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 9.8
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 9.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 111 bits (268), Expect = 5e-26
Identities = 51/97 (52%), Positives = 70/97 (72%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
ITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+
Sbjct: 499 ITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKD 558
Query: 182 KISDSDKQTILDKCNDTIKWLDSNRWPTRRSMSTSRK 292
K+ SDK+T+ +TI+WLDSN + +K
Sbjct: 559 KVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQK 595
Score = 38.7 bits (86), Expect = 6e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 259 ADKEEYEHKQKELEGIYNPIITKMYQ 336
A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 585 AAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 109 bits (261), Expect = 4e-25
Identities = 49/84 (58%), Positives = 66/84 (78%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
ITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+
Sbjct: 499 ITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKD 558
Query: 182 KISDSDKQTILDKCNDTIKWLDSN 253
K+ SDK+ I +TI+WLD N
Sbjct: 559 KVDASDKEAIDKAVKETIEWLDHN 582
Score = 43.2 bits (97), Expect = 3e-05
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1
Query: 259 ADKEEYEHKQKELEGIYNPIITKMYQ 336
A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 585 AAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 89.0 bits (211), Expect = 4e-19
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLK 178
+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L
Sbjct: 529 LVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLG 588
Query: 179 EKISDSDKQTILDKCNDTIKWLD 247
K+ DKQ +LD D +WL+
Sbjct: 589 GKVDPEDKQAVLDAVEDVAEWLE 611
Score = 29.1 bits (62), Expect = 0.46
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 259 ADKEEYEHKQKELEGIYNPIITKMY 333
A KEE+E ++++L+ + +PI K+Y
Sbjct: 617 ASKEEFEDQRQKLDAVVHPITQKLY 641
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 56.0 bits (129), Expect = 3e-09
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + +
Sbjct: 504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMM 563
Query: 182 KISDSDKQTI---LDKCNDTIKWLDSNRWPTRRS-MSTSRKNWKAF 307
K+ DK I L +C ++ D+N R++ + R KAF
Sbjct: 564 KLKRGDKSKIEAQLAECMSQLELEDTNTDALRKAELRLKRTVQKAF 609
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 46.8 bits (106), Expect = 2e-06
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++ K+
Sbjct: 542 ITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH--KD 598
Query: 182 KISDSDKQTILDKCND 229
K+ + + K D
Sbjct: 599 KLDQQAVEDLRSKITD 614
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 33.5 bits (73), Expect = 0.021
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 38 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 214
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 215 DKCNDTIKWLDSNRWPTRRSMSTSRKNWKAFTI 313
+ + + + D +++T RK W T+
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRKLWPQSTL 582
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.1 bits (72), Expect = 0.028
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED--EK 172
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAP 600
Query: 173 LKEKISDSDKQTILDKCNDTIKWLDSNRWPTRRSMSTSR 289
+ S + +L K D WL T +++ T++
Sbjct: 601 FTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAK 636
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.049
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 38 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 217
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 218 K 220
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.085
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 199
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 200 KQTILDKCNDTIK 238
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 332 TRVPEESPEVCRASRAENPEPEVPPPGLEALAPP 433
T P P A P P PPPG+ PP
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.26
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 32 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 199
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 24.6 bits (51), Expect(2) = 0.26
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 86 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLD 247
D ++E I A AL + E+ I +K T+ D+ NDT +WLD
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD 234
Score = 23.8 bits (49), Expect(2) = 0.26
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 335 RVPEESPEVCRASRAENPEPEVP 403
++ ++ P RASRA EP+ P
Sbjct: 235 KLGDKGPAAARASRAAAEEPQAP 257
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.46
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAEKYRNEDD 91
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 1.1
Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 14/158 (8%)
Frame = +2
Query: 62 EAEKYRNEDDKQKETIQAKNALES---YCFSMKST--MEDEKLKEKISDSD----KQTIL 214
E KY + +K+ + N LE + S K + ++D + E+ D + T L
Sbjct: 50 EEPKYHDNSNKESTNLDDLNMLEEPEHHDNSKKESTNLDDSNMLEEPKHHDNSNKESTNL 109
Query: 215 DKCN--DTIKWLDS-NRWPTRRSMST--SRKNWKAFTIR*LRRCTRVPEESPEVCRASRA 379
D N + K DS N+ T S +N K F I + E P+ C S+
Sbjct: 110 DDLNMSEEPKHHDSSNKESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCDDSKI 169
Query: 380 ENPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNH 493
E PE V E + +P +HT K + H
Sbjct: 170 EKPELHVNSKIEEPIHRIDSEHNEPEYHTESKNEESEH 207
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 181
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 182 KISDSDKQTILDKCNDTIK 238
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.1 bits (57), Expect = 1.8
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK--LKEKISDSDKQT 208
+E E AE+ N + ++E Q K A+E + + E E+ + EK+ + ++
Sbjct: 791 REAEEEAARAAEEEANRELHEQEEAQ-KRAIEERTRAAREAKEREQREMAEKL-ERQRRI 848
Query: 209 ILDKCNDTIKWLDSNRWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRA--SRAE 382
++ + + L R ++ S + A+ R V +SP R SR
Sbjct: 849 QQERDEEISRKLAEKAAARRANIGASSPSPGAWR-RGGASAGGVSRDSPRYSRGGYSRGS 907
Query: 383 NPEPEVPPPGLEALAPPSRRS 445
P E P A PPSRR+
Sbjct: 908 VPPRETLAPSKGAYVPPSRRN 928
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 53 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 157
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 83 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 244
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 2.4
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 19/177 (10%)
Frame = +2
Query: 17 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 166
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 167 ---EKLKEKISDSDKQTILDKCND-TIKWLDSNRWPTRRSMS--TSRKNWKAFTIR*LRR 328
EK++EK+++ DK ++ D D IK ++ RS+S T K K I + +
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPDQEIKNSRTSVQNGTRSVSKNTPEKETKVDKIDNVSK 846
Query: 329 CTRVPEESPEVCRASRA---ENPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNN 490
+ E SP C S A E EV L ++ P S + P C +
Sbjct: 847 --KDVETSPGSCETSSAFAKTYAEKEVTSINLPSVRKPLDESYYDHSISPFDPLCQS 901
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +2
Query: 35 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 187
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 188 SDSDKQTILDKCND 229
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 38 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 208
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 14 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 190
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 191 DSDKQT 208
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 3.2
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 2 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 178
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 179 EKISDSDKQTILDKC 223
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 32 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 154
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.8 bits (54), Expect = 4.2
Identities = 24/96 (25%), Positives = 39/96 (40%)
Frame = +2
Query: 11 TNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 190
TN E+IE ++ E T A +L+S + +T D +LK K
Sbjct: 571 TNGPSETISEDIEEILPSLESSERSSTPFLNTNSA--SLKSEVVQL-TTFSDFQLKLKTL 627
Query: 191 DSDKQTILDKCNDTIKWLDSNRWPTRRSMSTSRKNW 298
Q +LD W +S + +RR +ST + +
Sbjct: 628 ----QCVLDILQSLSNWAESGLYLSRRGVSTDEQGF 659
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 130
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 107 IQAKNA-LESYCFSMKS---TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNRW 259
+QA+ A LESY ++ T+ + K+++++SD KQ + I + +W
Sbjct: 114 LQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTKQLVTIDGLQYITGVSDTKW 168
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 35 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 214
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 215 D 217
D
Sbjct: 451 D 451
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +2
Query: 35 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 214
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 215 DKC 223
D C
Sbjct: 754 DGC 756
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 5.6
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 5 TITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 184
T D SKEE+E +V E E D +Q + K+ L++ F ++ KLK+K
Sbjct: 535 TQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNRKLKKK 585
Query: 185 ISD 193
S+
Sbjct: 586 ASN 588
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 302 PSNSFCLCSYSSLSASGWNP 243
PSN+ C + SL+ SGWNP
Sbjct: 197 PSNNGC---FRSLALSGWNP 213
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 116 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 241
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 232 HQVAGFQPLADKEEYEHKQKEL 297
H + GFQP +E+Y+H +L
Sbjct: 290 HHLNGFQPSQRQEDYKHTMVDL 311
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 ITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 163
+TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 291 MTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 7.4
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +2
Query: 20 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 190
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 191 DSDKQ--TILDK 220
D D++ T+ DK
Sbjct: 281 DKDQEQDTVSDK 292
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 383 NPEPEVPPPGLEALAPPSR 439
NP P PPPG E PPS+
Sbjct: 8 NPPPPPPPPGFE---PPSQ 23
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 29 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 199
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +2
Query: 17 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 196
DK + E+I + ++Y NED+ + +++ A S+ ++ +T++ + KI +S
Sbjct: 399 DKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTIQAKYSNRKIKNS 457
Query: 197 D 199
+
Sbjct: 458 N 458
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 24.6 bits (51), Expect = 9.8
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Frame = +2
Query: 188 SDSDKQTILDKCNDTIKWLDSNR-----WPTRRSMSTSRKNWKAFTIR*LRRCTRVPEES 352
S S + + LDK ND K ++ + P + + S+ + T + T P+E
Sbjct: 370 SSSSEPSNLDKINDVKKNIEVSANEPQPRPVKEDVPKSQVGGETDTTDVINNST--PKEE 427
Query: 353 PEVCRASRAENPEPEVPPPGLEALAPPSRRSIKPT 457
E ++ E PP E P S KP+
Sbjct: 428 TEESPSTELPETGKEQPPNKAEPAVPTEASSTKPS 462
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 KGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 196
+G + + E E EAE ++ ++D+ ++E ++ L S S E+E+ E SD
Sbjct: 194 EGLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEESSESESDE 253
Query: 197 DK 202
D+
Sbjct: 254 DE 255
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +2
Query: 8 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 187
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 188 SDSDKQ 205
D++++
Sbjct: 491 EDAERR 496
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 143 SMKSTMEDEKLKEKISD 193
S+K MEDEKL EK+++
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,073,515
Number of Sequences: 5004
Number of extensions: 40264
Number of successful extensions: 224
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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