Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30331
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    30   0.058
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    26   0.95 
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   0.95 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   6.7  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   8.8  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    23   8.8  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 29.9 bits (64), Expect = 0.058
 Identities = 19/48 (39%), Positives = 20/48 (41%)
 Frame = +2

Query: 263 TRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAENPEPEVPP 406
           T RS ST   N    TIR   R TR P   P V   +R   P    PP
Sbjct: 416 TTRSTSTKLSNCSMRTIRTTVRSTRAPSPGPIVYYPARETLPRLAQPP 463


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 323 RRCTRVPEESPEVCRASRAENPEPEVPPP 409
           R+C+R    SP+   A +++N  P VPPP
Sbjct: 44  RKCSR--NGSPKFAPAVQSKNRMPPVPPP 70


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 14  NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 133
           N++ R  +EE ++M NE+ K   +   QK+  Q    + S
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEHTVVGS 243


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +2

Query: 110 QAKNALESYCFSMKSTMED--EKLKEKISDSDKQTILDKCNDTIKWLDSNRWPTRRSMST 283
           +AK   E +   +K   E   E+LKE +  + +Q  L      I+ L++    +   + T
Sbjct: 675 KAKRWDEKHMAQLKLQKEKITEELKEVMKKTRRQGELTTVESQIRGLENRLKYSMNDLET 734

Query: 284 SRKN 295
           S+KN
Sbjct: 735 SKKN 738


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 66  QRSTETRMTSKRRPSRPRMHWNLTASA 146
           Q + ET     R P+R    W+ TA+A
Sbjct: 409 QLTEETYQEGTRDPARTPFQWDSTANA 435


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 338 VPEESPEVCRASRAENPEPEVPPP 409
           +PE+  E CRA    +  P VP P
Sbjct: 5   LPEQVIETCRARPLPSVIPGVPDP 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,034
Number of Sequences: 2352
Number of extensions: 10937
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)