BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30331 (553 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 26 0.22 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 3.6 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.6 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 3.6 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 3.6 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 3.6 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.6 AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 6.3 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.3 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 6.3 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 8.3 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 26.2 bits (55), Expect = 0.22 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 Query: 341 PEESPEVCRASRAENPEPEVPPPGLEALAPPSR 439 P +SP+ + NP PPPG APPS+ Sbjct: 27 PHQSPQAPQRGSPPNPSQG-PPPGGPPGAPPSQ 58 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.6 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 7 HYQRQRSSLQGRDRAY 54 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.6 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 7 HYQRQRSSLQGRDRAY 54 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.6 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 7 HYQRQRSSLQGRDRAY 54 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 3.6 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 7 HYQRQRSSLQGRDRAY 54 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.2 bits (45), Expect = 3.6 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 7 HYQRQRSSLQGRDRAY 54 HY R+RS + R+R Y Sbjct: 219 HYSRERSCSRDRNREY 234 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 22.2 bits (45), Expect = 3.6 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 7 HYQRQRSSLQGRDRAY 54 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor protein. Length = 587 Score = 21.4 bits (43), Expect = 6.3 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = +2 Query: 149 KSTMEDEKLKEKISDSDKQTILDKCN 226 + +++ EK+K +S +T+ KCN Sbjct: 331 RCSVKREKIKISVSYPSTETLNTKCN 356 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.4 bits (43), Expect = 6.3 Identities = 7/19 (36%), Positives = 15/19 (78%) Frame = +1 Query: 250 QPLADKEEYEHKQKELEGI 306 QP++ +++ EHK+K+ + I Sbjct: 63 QPISKRKDKEHKKKKSKTI 81 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 21.4 bits (43), Expect = 6.3 Identities = 7/19 (36%), Positives = 15/19 (78%) Frame = +1 Query: 250 QPLADKEEYEHKQKELEGI 306 QP++ +++ EHK+K+ + I Sbjct: 63 QPISKRKDKEHKKKKSKTI 81 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 21.0 bits (42), Expect = 8.3 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -1 Query: 316 SDCKCLPILSACAHTPPCRPAVGI 245 SDC L + TP PAVG+ Sbjct: 569 SDCDTLEYRNGEVTTPLFTPAVGV 592 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 147,605 Number of Sequences: 438 Number of extensions: 3263 Number of successful extensions: 13 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15827139 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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