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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30330
         (615 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)             155   2e-38
At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S ri...   155   3e-38
At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) simila...   153   7e-38
At1g58983.1 68414.m06666 40S ribosomal protein S2, putative simi...   153   7e-38
At1g58684.1 68414.m06657 40S ribosomal protein S2, putative           153   7e-38
At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) simila...   153   7e-38
At2g33800.1 68415.m04147 ribosomal protein S5 family protein con...    47   1e-05
At5g35970.1 68418.m04332 DNA-binding protein, putative similar t...    31   0.61 
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:...    31   0.61 
At3g22690.1 68416.m02863 pentatricopeptide (PPR) repeat-containi...    30   1.4  
At3g18530.1 68416.m02357 expressed protein similar to unknown pr...    29   3.2  
At5g59520.1 68418.m07459 zinc transporter (ZIP2) identical to zi...    28   4.3  
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea...    28   4.3  
At3g59390.2 68416.m06624 expressed protein protein CG15643 - Dro...    28   4.3  
At3g59390.1 68416.m06623 expressed protein protein CG15643 - Dro...    28   4.3  
At2g37930.1 68415.m04656 expressed protein                             28   5.7  
At2g04050.1 68415.m00386 MATE efflux family protein similar to r...    28   5.7  
At5g10020.1 68418.m01161 leucine-rich repeat transmembrane prote...    27   7.5  
At3g61590.1 68416.m06898 F-box family protein contains weak hit ...    27   7.5  
At2g25490.1 68415.m03052 F-box family protein (FBL6) contains si...    27   7.5  
At3g01450.1 68416.m00069 expressed protein                             27   9.9  

>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
          Length = 285

 Score =  155 bits (376), Expect = 2e-38
 Identities = 71/98 (72%), Positives = 83/98 (84%)
 Frame = +1

Query: 220 RQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNG 399
           +Q  +  L    +KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NG
Sbjct: 70  KQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNG 129

Query: 400 HIGLGVKCSKEVATAIRCAIILAKLSVLPVRRGYWGTR 513
           H+GLGVKCSKEVATAIR AIILAKLSV+PVRRGYWG +
Sbjct: 130 HVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 167



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +3

Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 614
           G KIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A
Sbjct: 165 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAA 201



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +2

Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
           ++++WVPVTKLGRLV  G I ++E IYL SL  K
Sbjct: 50  EEEKWVPVTKLGRLVAAGHIKQIEQIYLHSLPVK 83


>At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S
           ribosomal protein S2 - Arabidopsis thaliana,
           SWISSPROT:RS2_ARATH
          Length = 276

 Score =  155 bits (375), Expect = 3e-38
 Identities = 68/86 (79%), Positives = 80/86 (93%)
 Frame = +1

Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
           +KE++IID  +GPSL DEV+KIMPVQKQTRAGQRTRFKAF+ +GD+NGH+GLGVKCSKEV
Sbjct: 73  VKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEV 132

Query: 436 ATAIRCAIILAKLSVLPVRRGYWGTR 513
           ATAIR AIILAKLSV+P+RRGYWG +
Sbjct: 133 ATAIRGAIILAKLSVVPIRRGYWGNK 158



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +3

Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 614
           G KIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A
Sbjct: 156 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAA 192



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 23/34 (67%), Positives = 29/34 (85%)
 Frame = +2

Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
           ++++WVPVTKLGRLV+EGKI K+E IYL SL  K
Sbjct: 41  EEEKWVPVTKLGRLVKEGKITKIEQIYLHSLPVK 74


>At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) similar
           to ribosomal protein S2 GI:430711 from [Drosophila
           melanogaster]
          Length = 284

 Score =  153 bits (372), Expect = 7e-38
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +1

Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
           +KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEV
Sbjct: 81  VKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEV 140

Query: 436 ATAIRCAIILAKLSVLPVRRGYWGTR 513
           ATAIR AIILAKLSV+PVRRGYWG +
Sbjct: 141 ATAIRGAIILAKLSVVPVRRGYWGNK 166



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +3

Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 614
           G KIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAA 200



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
           ++ +WVPVTKLGRLV + KI KLE IYL SL  K
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVK 82


>At1g58983.1 68414.m06666 40S ribosomal protein S2, putative similar
           to ribosomal protein S2 GI:939717 from [Urechis caupo]
          Length = 284

 Score =  153 bits (372), Expect = 7e-38
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +1

Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
           +KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEV
Sbjct: 81  VKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEV 140

Query: 436 ATAIRCAIILAKLSVLPVRRGYWGTR 513
           ATAIR AIILAKLSV+PVRRGYWG +
Sbjct: 141 ATAIRGAIILAKLSVVPVRRGYWGNK 166



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +3

Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 614
           G KIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAA 200



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
           ++ +WVPVTKLGRLV + KI KLE IYL SL  K
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVK 82


>At1g58684.1 68414.m06657 40S ribosomal protein S2, putative 
          Length = 284

 Score =  153 bits (372), Expect = 7e-38
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +1

Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
           +KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEV
Sbjct: 81  VKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEV 140

Query: 436 ATAIRCAIILAKLSVLPVRRGYWGTR 513
           ATAIR AIILAKLSV+PVRRGYWG +
Sbjct: 141 ATAIRGAIILAKLSVVPVRRGYWGNK 166



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +3

Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 614
           G KIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAA 200



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
           ++ +WVPVTKLGRLV + KI KLE IYL SL  K
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVK 82


>At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) similar
           to ribosomal protein S2 GI:939717 from (Urechis caupo)
          Length = 284

 Score =  153 bits (372), Expect = 7e-38
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +1

Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
           +KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEV
Sbjct: 81  VKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEV 140

Query: 436 ATAIRCAIILAKLSVLPVRRGYWGTR 513
           ATAIR AIILAKLSV+PVRRGYWG +
Sbjct: 141 ATAIRGAIILAKLSVVPVRRGYWGNK 166



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = +3

Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 614
           G KIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAA 200



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2

Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
           ++ +WVPVTKLGRLV + KI KLE IYL SL  K
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVK 82


>At2g33800.1 68415.m04147 ribosomal protein S5 family protein
           contains Pfam profiles PF03719: Ribosomal protein S5,
           C-terminal domain, PF00333: Ribosomal protein S5,
           N-terminal domain
          Length = 303

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/62 (30%), Positives = 40/62 (64%)
 Frame = +1

Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRCAIILAKLSVL 483
           + V+++  V K  + G++ +F+A V +GD  G++G+G   +KEV  A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208

Query: 484 PV 489
            V
Sbjct: 209 QV 210


>At5g35970.1 68418.m04332 DNA-binding protein, putative similar to
           SWISS-PROT:Q60560 DNA-binding protein SMUBP-2
           (Immunoglobulin MU binding protein 2, SMUBP-2)
           [Mesocricetus auratus]
          Length = 961

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 350 PARVCFCTGMIFRTSSFRDGPRKKSMISNSLIVKKTSK 237
           P R  FC+G+   +S  +  PR+KS +S+ L  KK  K
Sbjct: 43  PTRKVFCSGVNGGSSVTKKKPRRKSNVSDKLRFKKIEK 80


>At2g33240.1 68415.m04072 myosin, putative similar to myosin
            (GI:433663) [Arabidopsis thaliana]; myosin my5A
            (SP:Q02440) {Gallus gallus}
          Length = 1770

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = -1

Query: 615  AQTQFQYHEGQESAGLLQNHTCR*PCKGRYVAFRSCTPVTSSNW----*NRQLSKDNSAS 448
            A+ +FQY   +++A ++Q+   R  C+ RY+  +     T   W     +R+L K   A+
Sbjct: 838  ARVEFQYRTKRKAAIIIQSQIRRCLCRRRYLRTKKAAITTQCGWRVKVAHRELRKLKMAA 897

Query: 447  NGSGDFLAALHTQTNMTVVVANGNKCLE 364
              +G   A    +T +   V     CLE
Sbjct: 898  KETG---ALQDAKTKLEKEVEELTSCLE 922


>At3g22690.1 68416.m02863 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 978

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 180 LSPNSAVLFAKEKSTNSRAF-TCFLYNQRIRDH 275
           L    ++ FAKE   NS ++ TCF+YN  IR +
Sbjct: 77  LGTRESLSFAKEVFENSESYGTCFMYNSLIRGY 109


>At3g18530.1 68416.m02357 expressed protein similar to unknown
           protein GB:AAF24615 from [Arabidopsis thaliana]
          Length = 297

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 22/75 (29%), Positives = 33/75 (44%)
 Frame = -2

Query: 521 LSDLVPQ*PLRTGKTDNLARIIAHRMAVATSLLHFTPKPI*PLLSPMATNALKRVRCPAR 342
           L  L+ Q  L++ +        A R  VA +  H +P  + P L P   N   R+R  A 
Sbjct: 163 LDRLLTQLLLKSSQDKRFVCEAAERALVAMTT-HVSPALLLPKLRPCLKNKSPRIRAKAS 221

Query: 341 VCFCTGMIFRTSSFR 297
            CF +G + R  + R
Sbjct: 222 ACF-SGCVPRLEAAR 235


>At5g59520.1 68418.m07459 zinc transporter (ZIP2) identical to zinc
           transporter ZIP2 [Arabidopsis thaliana]
           gi|3252868|gb|AAC24198; member of the Zinc (Zn2+)-Iron
           (Fe2+) permease (ZIP) family, PMID:11500563
          Length = 353

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 370 AFVAIGDNNGHIGLGVKCSKE 432
           AFVA G NN H+G  V  S+E
Sbjct: 149 AFVAAGSNNNHVGASVGESRE 169


>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
           family protein similar to WD-repeat protein mip1
           (SP:P87141) [Schizosaccharomyces pombe]
          Length = 1354

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 553 LPVTLQGTVCGFPILYPSNLF 491
           LP+ LQG + GF +  PSN++
Sbjct: 429 LPIVLQGAITGFILPLPSNIY 449


>At3g59390.2 68416.m06624 expressed protein protein CG15643 -
           Drosophila melanogaster, EMBL:AE003499
          Length = 273

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 375 CCHWRQQRSYWFGCEVQQGSRHCHSMRYYPC*VVCFTSSKRLL----GYKIGKPHT 530
           CC W+ +R    GC +   S+ C+S  +  C   C   S+ LL      K+ KP T
Sbjct: 69  CCPWKGERFSCHGCNIL--SQCCNSYEF--CVSCCLNPSQTLLEKVVKVKVAKPAT 120


>At3g59390.1 68416.m06623 expressed protein protein CG15643 -
           Drosophila melanogaster, EMBL:AE003499
          Length = 273

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 375 CCHWRQQRSYWFGCEVQQGSRHCHSMRYYPC*VVCFTSSKRLL----GYKIGKPHT 530
           CC W+ +R    GC +   S+ C+S  +  C   C   S+ LL      K+ KP T
Sbjct: 69  CCPWKGERFSCHGCNIL--SQCCNSYEF--CVSCCLNPSQTLLEKVVKVKVAKPAT 120


>At2g37930.1 68415.m04656 expressed protein
          Length = 467

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 190 TRPSCSRRKNRQTREHLLVFFTI-KEFEIIDFFLGPSLNDEVLKIM 324
           TRP    +K   +R H L+ FT+ K   +  F +G + N+ +   M
Sbjct: 196 TRPPTKEKKQSSSRVHALLQFTLRKGINLFQFVVGDNSNNVLAATM 241


>At2g04050.1 68415.m00386 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile: PF01554
           uncharacterized membrane protein family
          Length = 476

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +3

Query: 525 HTVPCKVTGKCGSVTVRL 578
           H VPCK T K G VTV L
Sbjct: 11  HLVPCKDTWKSGQVTVEL 28


>At5g10020.1 68418.m01161 leucine-rich repeat transmembrane protein
            kinase, putative receptor-like protein kinase ERECTA,
            Arabidopsis thaliana, EMBL:AC004484
          Length = 1048

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
 Frame = +1

Query: 280  FFLGPSLN--DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGH--------IGLGVKCSK 429
            FFL  SL    E L   P +   R+   T +KA +    +NGH        +GL V+  K
Sbjct: 753  FFLDVSLKLTAEELSRAPAEVLGRSSHGTLYKATL----DNGHMLTVKWLRVGL-VRHKK 807

Query: 430  EVATAIRCAIILAKLSVLPVRRGYWGTRSESHI 528
            + A   +    L   +++P+R  YWG R +  +
Sbjct: 808  DFAREAKKIGSLKHPNIVPLRAYYWGPREQERL 840


>At3g61590.1 68416.m06898 F-box family protein contains weak hit to
           Pfam PF00646: F-box domain; stamina pistilloidia (Stp) -
           Pisum sativum, EMBL:AF004843
          Length = 411

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 3   LSEPIVQQWRTLLQP 47
           +S PI +QWRTL++P
Sbjct: 150 VSNPITKQWRTLIEP 164


>At2g25490.1 68415.m03052 F-box family protein (FBL6) contains
           similarity to grr1 GI:2407790 from [Glycine max]
          Length = 628

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 380 PLATTTVILVWV*SAARKSPLPFDALLSLLSCLFYQFEEVTGVQDRKA 523
           P   + V+   + SA  K P+  D L     CLF  F  ++G Q+R A
Sbjct: 42  PSKRSRVVAPTIFSAFEKKPVSIDVLPD--ECLFEIFRRLSGPQERSA 87


>At3g01450.1 68416.m00069 expressed protein
          Length = 326

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -2

Query: 455 AHRMAVATSLLHFTPKPI*PLLSPMATNALKRVRCPARVCF 333
           A   A+     H +P  + P L P   N   R+R  A  CF
Sbjct: 184 AAEKALVAMTAHVSPALLLPKLQPFLKNRNPRIRAKASTCF 224


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,416,246
Number of Sequences: 28952
Number of extensions: 282701
Number of successful extensions: 806
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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