Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30327
(471 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 138 8e-32
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 133 2e-30
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 116 3e-25
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 111 6e-24
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 111 1e-23
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 108 7e-23
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 103 1e-21
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 98 7e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 96 3e-19
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 86 4e-16
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 73 4e-12
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 66 4e-10
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 65 6e-10
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 56 3e-07
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 55 7e-07
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 53 3e-06
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 50 3e-05
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 50 3e-05
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 48 1e-04
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 47 2e-04
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 47 2e-04
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 45 0.001
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.005
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 40 0.021
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 40 0.036
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 37 0.26
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 37 0.26
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 37 0.26
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 36 0.45
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 34 1.4
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 34 1.8
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 33 2.4
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 33 2.4
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 33 2.4
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 33 3.2
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 33 3.2
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 33 4.2
UniRef50_UPI0000E81903 Cluster: PREDICTED: similar to Rho-guanin... 32 7.3
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 7.3
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 32 7.3
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 31 9.7
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 31 9.7
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 138 bits (333), Expect = 8e-32
Identities = 68/83 (81%), Positives = 72/83 (86%)
Frame = +3
Query: 3 AFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRIL 182
AFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPFT NVSIRGRIL
Sbjct: 51 AFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRIL 109
Query: 183 TGVVQKMKMQRTIVIRRDYLHYL 251
TGVVQKMKMQRTIVIRRDYLHY+
Sbjct: 110 TGVVQKMKMQRTIVIRRDYLHYV 132
Score = 103 bits (246), Expect = 3e-21
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+YNRFEKRH+NMSVHLSPCFRDVEIGD+VT+GECRPLSKTVRFNVLKV
Sbjct: 134 KYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGECRPLSKTVRFNVLKV 181
Score = 49.6 bits (113), Expect = 3e-05
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 4/40 (10%)
Frame = +3
Query: 3 AFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 110
+FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 8 SFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 133 bits (321), Expect = 2e-30
Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167
A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI
Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68
Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251
RGRIL+GVV KMKMQRTIVIRRDYLHY+
Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96
Score = 102 bits (244), Expect = 5e-21
Identities = 44/48 (91%), Positives = 48/48 (100%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 116 bits (279), Expect = 3e-25
Identities = 55/84 (65%), Positives = 63/84 (75%)
Frame = +3
Query: 3 AFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRIL 182
AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFT VSIRG+IL
Sbjct: 12 AFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKIL 71
Query: 183 TGVVQKMKMQRTIVIRRDYLHYLP 254
TG V KM RTIVIRR YLHY+P
Sbjct: 72 TGTVVSTKMHRTIVIRRAYLHYIP 95
Score = 82.2 bits (194), Expect = 5e-15
Identities = 34/48 (70%), Positives = 45/48 (93%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+YNR+EKRH+N+ VH+SP FR V++GDIVT+G+CRP+SKTVRFNV+KV
Sbjct: 96 KYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 111 bits (268), Expect = 6e-24
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +3
Query: 3 AFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRIL 182
AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF VSIRGRIL
Sbjct: 12 AFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRIL 68
Query: 183 TGVVQKMKMQRTIVIRRDYLHYLP 254
TG V KM RTI+IRR+YLH++P
Sbjct: 69 TGTVVSTKMHRTIIIRREYLHFIP 92
Score = 78.6 bits (185), Expect = 6e-14
Identities = 32/48 (66%), Positives = 43/48 (89%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+YNR+EKRH+N++ H+SP FR + GD+VT+G+CRPLSKTVRFNVL+V
Sbjct: 93 KYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQCRPLSKTVRFNVLRV 139
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 111 bits (266), Expect = 1e-23
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 AFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRG 173
AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFT NVS+RG
Sbjct: 38 AFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSVRG 97
Query: 174 RILTGVVQKMKMQRTIVIRRDYLHYL 251
IL G+V KM RTI+IRRDYLHY+
Sbjct: 98 AILKGIVISTKMTRTIIIRRDYLHYV 123
Score = 80.6 bits (190), Expect = 2e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+YNR+EKRHRN+ VH+SP F V+ GDIV G+CRPLSKTVRFNVLKV
Sbjct: 125 KYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 108 bits (259), Expect = 7e-23
Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 5/103 (4%)
Frame = +3
Query: 3 AFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167
AF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFT VSI
Sbjct: 8 AFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 67
Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYLPNTIGSRNGTGICPC 296
RGRI+ G KM RTI++RR+YLH++ N G C
Sbjct: 68 RGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLC 110
Score = 71.7 bits (168), Expect = 7e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2
Query: 263 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 124 RYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 103 bits (248), Expect = 1e-21
Identities = 48/87 (55%), Positives = 66/87 (75%), Gaps = 5/87 (5%)
Frame = +3
Query: 6 FQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRG 173
+QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFT NVSIRG
Sbjct: 11 YQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRG 70
Query: 174 RILTGVVQKM-KMQRTIVIRRDYLHYL 251
RIL GVV KM+RT+V+RR+YLHY+
Sbjct: 71 RILRGVVVSAGKMKRTVVVRRNYLHYI 97
Score = 75.8 bits (178), Expect = 5e-13
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+Y R+EKRH N SVH SP DV+ GD VT+GECRPLSKTVRFNVLKV
Sbjct: 99 KYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 98.3 bits (234), Expect = 7e-20
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +3
Query: 33 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQ 212
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 213 RTIVIRRDYLHYL 251
RTI+IRR+YLH++
Sbjct: 65 RTIIIRRNYLHFI 77
Score = 66.5 bits (155), Expect = 3e-10
Identities = 28/48 (58%), Positives = 40/48 (83%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+Y R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+NVL+V
Sbjct: 79 KYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 96.3 bits (229), Expect = 3e-19
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +3
Query: 33 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQ 212
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFT VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 213 RTIVIRRDYLHYL 251
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 85.8 bits (203), Expect = 4e-16
Identities = 39/85 (45%), Positives = 50/85 (58%)
Frame = +3
Query: 48 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVI 227
+ +K KN+G+G K P EAI Y DKKCPF +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 228 RRDYLHYLPNTIGSRNGTGICPCIC 302
RRDYLH++ PC C
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHC 100
Score = 79.4 bits (187), Expect = 4e-14
Identities = 33/49 (67%), Positives = 43/49 (87%)
Frame = +2
Query: 251 TQYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
++Y RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 84 SKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 72.5 bits (170), Expect = 4e-12
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +3
Query: 90 GFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 248
GFK P A YIDKKCPFT +V++RGR+ GVV+KMK ++TIV+ +Y+HY
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHY 90
Score = 55.2 bits (127), Expect = 7e-07
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGECRPLSKT 373
+Y R+ +RH N SVH+SPCF + +GD V GE RPLSKT
Sbjct: 93 KYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 66.1 bits (154), Expect = 4e-10
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+YNRF KRH+N+ HLS ++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 65 KYNRFVKRHKNIPAHLSNLLT-CKVGDIVIIAECRPISKTVRFNVIKV 111
Score = 57.6 bits (133), Expect = 1e-07
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +3
Query: 129 IDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 251
IDKKCPF +++RGRIL G V+K+KM+ T++IR DYL +L
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFL 63
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 65.3 bits (152), Expect = 6e-10
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +2
Query: 284 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF + KV
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 56.4 bits (130), Expect = 3e-07
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 394
++ R+EKR R + HL C DV +GD V I ECRPLSKT+ F V++
Sbjct: 60 KFERYEKRTRRYAAHLPSCIGDVNVGDSVRIMECRPLSKTITFCVIE 106
Score = 44.8 bits (101), Expect = 0.001
Identities = 14/40 (35%), Positives = 30/40 (75%)
Frame = +3
Query: 132 DKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 251
D+ CPF ++ +RG+I+ G + K+ MQ++I++ R+++ Y+
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYM 58
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 55.2 bits (127), Expect = 7e-07
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +3
Query: 60 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDY 239
+ R K++GLG K PR + D CPF N+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 240 LHY 248
Y
Sbjct: 60 YRY 62
Score = 48.4 bits (110), Expect = 8e-05
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+Y R+E+R + H PC D + GD V I ECRPLSKT F V++V
Sbjct: 65 KYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+YNR+E+R + + HL C V+ GD+V IGE P+SKTV+F VL V
Sbjct: 65 KYNRYERRSKKIHAHLPDCI-SVKEGDVVVIGETMPISKTVKFTVLGV 111
Score = 38.7 bits (86), Expect = 0.064
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 DKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 248
D CP+ + +RG +L GVV K + +R +V++ YL+Y
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYY 62
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 391
+Y R+E R ++ +L C +D++ GD V IGE RPLSKT F VL
Sbjct: 57 KYERYELRRTRITAYLPECLKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +2
Query: 251 TQYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 394
++Y R+EKR + H C ++GDIVTI ECRP+SKT F V+K
Sbjct: 58 SKYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVVK 104
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 75 KNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYL 242
+++GL P E + Y CPF + +RG+IL G V KM T+VI R Y+
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYM 54
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +3
Query: 75 KNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 254
+N+GL K P E D CP+ +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Score = 34.7 bits (76), Expect = 1.0
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 394
+Y R + + VH+ C + ++ GD V ECR L+KT+ F +++
Sbjct: 60 KYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIVE 105
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 391
+Y R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
Score = 39.9 bits (89), Expect = 0.028
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +3
Query: 75 KNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 254
+++G+ + P +A+ D KCP+ +V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 373
+Y+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 57 KYDRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 81 VGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDY 239
+GL + P E T D+ CPF +S+RG+ L G V M++T+V+ R+Y
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREY 51
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 391
+YNR+E+R + M V + C +V+ GD V I E RPLSKT+ + V+
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
Score = 36.3 bits (80), Expect = 0.34
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +3
Query: 75 KNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 251
KN+G+ P ++ D CP+ ++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYI 59
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -2
Query: 248 VVKVIAADHDSSLHLHFLNDAGEDAAADRNVXSEGTLLVNVGTLNRLSGSFE 93
V++VI++D+D ++H N G+D +D N SE T VNV T N FE
Sbjct: 110 VMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 40.3 bits (90), Expect = 0.021
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 75 KNVGL-GFKTPREAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRR 233
+++G+ G K P E D +CPF +S+RG+IL G+V KM + IV++R
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKR 51
Score = 39.9 bits (89), Expect = 0.028
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 394
+Y R ++ + + PC + +IGDI+TI ECRPL+K F V++
Sbjct: 59 KYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 39.5 bits (88), Expect = 0.036
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 391
+Y R+E R + V + PC V+ GD V + E RPL+K+V F V+
Sbjct: 62 KYKRYEVRRKKKHVRVPPCI-PVKPGDEVIVAETRPLAKSVSFVVI 106
Score = 33.9 bits (74), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 132 DKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 248
D CP+ + +RG++L V+K+KM V +YL+Y
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYY 59
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 36.7 bits (81), Expect = 0.26
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 75 KNVGLGFKTP-REAIEGTYIDKKCPFTXNVSIRGRILTGVVQKMKMQRTIVIRRD 236
+ +GL P REA +G DK PF + IRG++ G + K + T+VI ++
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKE 54
Score = 36.7 bits (81), Expect = 0.26
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 251 TQYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
T++ R+ + + H+ P DV GD V ECRP++K+V F V++V
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 36.7 bits (81), Expect = 0.26
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 257 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
Y ++ KR + H + +IGD+V I E RPLSKT R+ V+++
Sbjct: 32 YKKYVKRTKKYHAHDER--NECKIGDVVEIEETRPLSKTKRWRVVRI 76
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.7 bits (81), Expect = 0.26
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 263 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
RF+KR + + H E+GD V I ECRP+SKT F +++V
Sbjct: 50 RFKKR-KKFNTHDEKNL--AEVGDFVKIAECRPISKTKHFRLVEV 91
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 35.9 bits (79), Expect = 0.45
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 373
+Y ++ KR + VH ++GDIV I +CRP+SKT
Sbjct: 48 KYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQCRPISKT 85
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 34.3 bits (75), Expect = 1.4
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+Y + KR + VH V++GD++ ECRPLSK F++ KV
Sbjct: 36 KYRKIVKRFKKYIVHDES--NAVKVGDMIEAIECRPLSKRKSFSLHKV 81
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 281 RNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
++ H + +GDIV I E RPLSKT R+ V+K+
Sbjct: 49 KSKKYHAHDEHNECRVGDIVMIRETRPLSKTKRWVVVKI 87
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 257 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
Y ++ KR + +SVH S EIGDIV E +SKT + ++K+
Sbjct: 36 YGKYIKRSKKLSVHDSK--NKAEIGDIVECAESLKISKTKSWILIKI 80
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 33.5 bits (73), Expect = 2.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 326 IGDIVTIGECRPLSKTVRFNVLKV 397
+GD VTI CRP S T RF ++K+
Sbjct: 51 VGDAVTIQPCRPRSATKRFEIIKI 74
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 33.5 bits (73), Expect = 2.4
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+Y + KR + +H +V++GD V ECRPLSK F + V
Sbjct: 32 RYRKIVKRFKKYLIHDER--NEVKVGDTVVAVECRPLSKRKSFRLKSV 77
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 33.1 bits (72), Expect = 3.2
Identities = 24/54 (44%), Positives = 30/54 (55%)
Frame = +2
Query: 233 RLPSLPTQYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 394
RL P +Y++F ++ R H + EIGDIV I E R LSKT F VLK
Sbjct: 25 RLTKHP-KYHKFVRKTRRYHAHDEN--NECEIGDIVEIEESRKLSKTKAF-VLK 74
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 33.1 bits (72), Expect = 3.2
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 251 TQYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 373
+ Y +F R + VH + +V GDIV I ECRP+SKT
Sbjct: 32 SMYKKFINRTTKIYVHDTNNISNV--GDIVEITECRPISKT 70
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 32.7 bits (71), Expect = 4.2
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 329 GDIVTIGECRPLSKTVRFNVLKV 397
GD+V I ECRP+SKT + V KV
Sbjct: 60 GDLVEIEECRPISKTKSWRVAKV 82
>UniRef50_UPI0000E81903 Cluster: PREDICTED: similar to Rho-guanine
nucleotide exchange factor; n=1; Gallus gallus|Rep:
PREDICTED: similar to Rho-guanine nucleotide exchange
factor - Gallus gallus
Length = 1345
Score = 31.9 bits (69), Expect = 7.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 394 FQNIESNCFGQRSAFADRYNITNLHVPEARRQMHGHIPVPFLEPIVL 254
+Q + +C + AF + N + P+A HG I P +EP++L
Sbjct: 1276 YQQMSFSCKSNKDAFNNDLNASQTQGPQAGSPNHGSIQPPQVEPLML 1322
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 7.3
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 34 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 153
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 31.9 bits (69), Expect = 7.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
+Y ++ K+ H +IGDIV I E RPLSKT R+ + +V
Sbjct: 38 KYGKYVKKTSVFKAHDEK--NQAKIGDIVKIRETRPLSKTKRWALAEV 83
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 31.5 bits (68), Expect = 9.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 329 GDIVTIGECRPLSKTVRFNVLKV 397
GD+V I +CRP+SKT F V ++
Sbjct: 64 GDVVRIEQCRPISKTKHFAVAEI 86
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 31.5 bits (68), Expect = 9.7
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 257 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
Y + KR + H P ++GD+V I E RP+SK RF VL++
Sbjct: 32 YGKVIKRSKKYLAH-DP-EEKYKLGDVVEIIESRPISKRKRFRVLRL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,507,455
Number of Sequences: 1657284
Number of extensions: 8163130
Number of successful extensions: 19184
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 18705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19166
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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