BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30327 (471 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 133 3e-31 BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 133 3e-31 BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 133 3e-31 BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 133 3e-31 BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 133 3e-31 BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 133 3e-31 BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 133 3e-31 BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 133 3e-31 AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 133 3e-31 AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 102 7e-22 >X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ribosomal protein S11. ). Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 protein. Length = 158 Score = 133 bits (321), Expect = 3e-31 Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 5/88 (5%) Frame = +3 Query: 3 AFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSI 167 A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFT NVSI Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68 Query: 168 RGRILTGVVQKMKMQRTIVIRRDYLHYL 251 RGRIL+GVV KMKMQRTIVIRRDYLHY+ Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYI 96 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 98 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145 >AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 protein. Length = 83 Score = 102 bits (244), Expect = 7e-22 Identities = 44/48 (91%), Positives = 48/48 (100%) Frame = +2 Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397 +YNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV Sbjct: 23 KYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 70 Score = 43.6 bits (98), Expect = 4e-04 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = +3 Query: 189 VVQKMKMQRTIVIRRDYLHYL 251 VV KMKMQRTIVIRRDYLHY+ Sbjct: 1 VVTKMKMQRTIVIRRDYLHYI 21 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 64,869,777 Number of Sequences: 237096 Number of extensions: 1277817 Number of successful extensions: 2262 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2192 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2253 length of database: 76,859,062 effective HSP length: 84 effective length of database: 56,942,998 effective search space used: 4099895856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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