Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30327
         (471 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   124   6e-29
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   124   6e-29
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   112   3e-25
AL021086-2|CAA15933.1|  995|Drosophila melanogaster EG:86E4.2 pr...    27   9.7  

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  124 bits (299), Expect = 6e-29
 Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   AFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRG 173
           AFQKQ  V LNRK   G  K+K +R  ++VGLGFKTPREAI+GTYIDKKCP+T +V IRG
Sbjct: 8   AFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRG 67

Query: 174 RILTGVVQKMKMQRTIVIRRDYLHYL 251
           RILTGVV+K KMQRTIVIRRDYLH++
Sbjct: 68  RILTGVVRKAKMQRTIVIRRDYLHFV 93



 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = +2

Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
           +Y+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 95  KYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  124 bits (299), Expect = 6e-29
 Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   AFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRG 173
           AFQKQ  V LNRK   G  K+K +R  ++VGLGFKTPREAI+GTYIDKKCP+T +V IRG
Sbjct: 8   AFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRG 67

Query: 174 RILTGVVQKMKMQRTIVIRRDYLHYL 251
           RILTGVV+K KMQRTIVIRRDYLH++
Sbjct: 68  RILTGVVRKAKMQRTIVIRRDYLHFV 93



 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = +2

Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
           +Y+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 95  KYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  112 bits (269), Expect = 3e-25
 Identities = 53/84 (63%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   AFQKQ-ATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTXNVSIRGRI 179
           +F+KQ A V + RK    +K  R ++ +GLGF+ P EAI+GTYIDKKCP+T +V IRGRI
Sbjct: 9   SFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIRGRI 68

Query: 180 LTGVVQKMKMQRTIVIRRDYLHYL 251
           LTGVV+K KMQRTIVIRRDYLH++
Sbjct: 69  LTGVVRKAKMQRTIVIRRDYLHFV 92



 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = +2

Query: 254 QYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 397
           +Y+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 94  KYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141


>AL021086-2|CAA15933.1|  995|Drosophila melanogaster EG:86E4.2
            protein.
          Length = 995

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 54   RKDMRHHKNVGLGFKTPREAIEGTYIDKKC 143
            RK++ HH     G  T R++  GT+I K+C
Sbjct: 953  RKELPHHLFACTGRSTLRDSPIGTFIRKRC 982


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,272,288
Number of Sequences: 53049
Number of extensions: 396847
Number of successful extensions: 866
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)